Solanum dulcamara (climbing nightshade): 129870632
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Entry
129870632 CDS
T09577
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129870632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdul02000
]
129870632
04147 Exosome [BR:
sdul04147
]
129870632
04090 CD molecules [BR:
sdul04090
]
129870632
Enzymes [BR:
sdul01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
129870632
Transporters [BR:
sdul02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
129870632
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129870632
CD molecules [BR:
sdul04090
]
Proteins
129870632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
Zeta_toxin
AAA_16
RsgA_GTPase
DUF87
AAA_22
DLIC
G-alpha
AAA_30
AAA_28
Motif
Other DBs
NCBI-GeneID:
129870632
NCBI-ProteinID:
XP_055801436
LinkDB
All DBs
Position
2:complement(19110951..19116069)
Genome browser
AA seq
1252 aa
AA seq
DB search
MGKRGGLFRYGDGVDKLLMFFGTIGCIGDGLMTPLNMFILSTLIDDYGGATNDDASFTND
IVDKYSLRLLYVAVGVGISACIGGICWTRSAERQTSRIRMEYLKSVLRQEVSFFDKQDAS
SSNSFQVVSTISADAHSIQDAIAEKIPNCVAHLSTFIFGLILAFYLSWRLALASVPFSLG
FVIPGVAFGKLLMIQGMKMKDAYGAAGSVAEQAISSIRTVYSYVGENETLQRFSNGLEES
LNLGVKQGLTKGLLLGSMGMIYVSWAFQSWAGSVLVANRGESGGRVFISALCVVLGGLSC
MSALPNISFITEATIAAARIFELIDRVPQIDSEDSKGKILAYVRGDIEFKDVTFRYPSRP
DIQVLQDFSLKVKAGKAVAIVGGSGSGKSTVISLLERFYDPIKGDILLDGHKIKKLQLKW
LRSQMGLVNQEPVLFATSIKENILFGKEGASMKMVVEASKAANAHEFVASLPNGYDTHVG
QFGFQMSGGQKQRIAIARALIKDPKILLLDEATSALDAQSERIVQKALDQASQGRTTIII
AHRLSTIRRADKIVVLESGRIVESGSHDDLMCKTDEEGVYFKMVKLQQSTTNGEGPPSPY
VPKETRSYTRSYNMPRLPYVALSSWQNSPASPFSPAISVSYAPTIHTCSYYDSDHEYLEN
FSHPSLSTWRLLQMNAPEWKIALLGCLGAITFGILQPLYAFCLGSVVSAYTSNDISKIKS
EIKVYSIVFLSIGLTSFIANLLQHYNFAKMGEKLTKRIREKVLSNLLTFEVGWYDRDENM
SAAVCARLSTEARMVRSLVGDRMSLLLQVFVSASTAFVLALIVAWRVAIVLISIQPLLIA
SFYSRSVLMKRMSERSQKAQSEGSQLASEAVINHRTITAFSSQDRMLDLFTETQKGPRKE
NIRQSLLSGAGLFCSQFLTTAAIALTYWYGGRLMNRKLLTSKHLFQVFFLLMSTGKNIAD
TGSMTSDLARGSSAVASVFAILDRKTEIEPENSEGLKVTKVLKGNIELKNIFFYYPSRPD
QAIFQGMNLKIESGKTVALLGQSGSGKSTIIGLIERFYDPIKGQVLIDDRDIKSYNLKSL
RSHIALVSQEPTLFAGSIRENIIYGKEEATDSEIKKAAIRANAHEFISAMEDGYETYCGE
RGAQLSGGQRQRIALARAILKNPTILLLDEATSALDSVSENLVQEALDMMMINRTSVVVA
HRLSTIQKADIIAVIKNGKVVEQGSHSQLLSLGKNGSYYGLMKLQSGHSPYR
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagagaggtgggcttttcagatatggtgatggtgttgataaattgctaatgttt
tttggtactataggatgcattggagatgggctaatgactccacttaatatgtttattctt
agtactcttatagatgattatggaggtgctactaatgatgatgcttctttcactaatgat
attgttgacaagtactcactcaggttgctctacgttgcagttggagttggtatatccgct
tgtattgggggaatttgttggacaagaagtgcagagagacaaacaagtcgaataaggatg
gagtacttaaaatcagtgcttaggcaagaagttagtttctttgacaagcaagatgcttcc
tccagtaatagttttcaagttgtttccacaatttcagctgatgctcattcaattcaagat
gctatagcagagaagatacctaattgtgttgctcacctgtcaacattcatttttggccta
attcttgctttctacctttcatggagactagcattggcttcagttccattttcacttggt
tttgttatacctggtgtagcatttgggaagctacttatgatccaaggaatgaagatgaag
gatgcctatggagctgcagggagtgtagcagaacaagcaatttcatcaattcgaacagtt
tactcttacgttggagaaaatgaaacactacaaagattcagcaatggtcttgaggaaagt
ttgaatcttggtgtgaagcaagggcttactaagggattgttgttaggaagtatgggaatg
atttatgtctcatgggcatttcaatcctgggcagggagtgtacttgttgctaatagagga
gaaagtggtggtcgcgtttttatatcagctctttgtgttgttcttggaggactgtcttgt
atgagtgcacttcctaatatatcattcatcactgaggcaacaattgctgctgcaagaatt
ttcgaactgattgatcgtgttcctcaaatagattctgaagatagtaaagggaaaattcta
gcatatgtaagaggagatatcgagtttaaggatgttactttcaggtatccatcaagacca
gatatccaggtcctccaagattttagtcttaaagtgaaagctggaaaggctgtagcaatt
gtgggaggcagtggttccggaaagtccactgtcatttctttgctagaaaggttttatgat
ccaatcaaaggagatatcttacttgatggacataaaataaagaaactgcagcttaaatgg
ttgagatctcagatggggcttgtaaatcaggagcctgttctatttgctacatccatcaag
gaaaatatactcttcggcaaagaaggagcttcaatgaaaatggttgttgaagcttctaag
gctgcaaatgcacatgaatttgtagcctctttaccgaatgggtatgatactcatgtggga
caatttggttttcaaatgtctggtggacagaagcaaaggattgctatagcaagggcattg
attaaggacccgaaaattcttttactcgatgaagctacaagcgcactggatgcacaatca
gaaagaattgtccaaaaggccctagaccaggcttcacaaggaaggacaacaatcatcatt
gcccatcgcctcagtacaatacgcagggctgacaaaattgtagtccttgagtcagggaga
attgttgaatctggttctcatgatgatctaatgtgtaagactgatgaagaaggtgtttac
tttaaaatggtcaaattgcagcaatcaacaacaaacggtgaagggccacctagtccgtat
gttcctaaagagacaagaagctacacgaggagttataatatgcctaggttgccttatgtc
gctttgtcaagttggcaaaatagccctgcctctccttttagcccagcaataagtgtcagt
tatgctcccaccattcatacatgctcttattatgatagtgaccatgagtatttagagaat
ttctctcatccaagtctctcaacgtggcgtttgctccaaatgaatgcacccgagtggaag
atagctttgttgggatgtttaggagctattacctttggtatacttcaaccactttatgca
ttttgcttgggatcagttgtatcagcatatacatcaaatgatatttcaaagataaagtcg
gagatcaaagtttacagcatagtctttttgagcataggtttgaccagcttcattgccaat
ctactccaacattacaattttgctaaaatgggagagaaactgaccaagagaatcagggaa
aaggttctttcaaacttgctaacatttgaagtgggctggtatgatcgagatgagaacatg
agtgcagcagtctgtgcaaggctctccactgaagctcgtatggttcgatcccttgtgggt
gatcgtatgtcattgctactacaggtttttgtcagtgcttcaactgcttttgtgcttgca
ttgattgttgcatggagagttgctattgtactaatatccatacaacctttactcatagca
agcttctactcgcgaagtgttctgatgaaaagaatgtcagaaagatcccaaaaggcacag
agtgaaggaagccagctagcaagtgaagcagtaatcaatcacaggactatcaccgccttc
tcttctcaagatagaatgttggacctctttactgaaactcagaaagggccaagaaaagaa
aatattcgacagtcattgctttctggtgctggcttgttttgctctcaatttctaaccaca
gctgccattgccttaacatattggtatgggggaagactaatgaacagaaagttactcact
tcaaagcacctatttcaagttttcttccttttgatgagtaccggaaaaaatatagcagat
actggaagtatgacttctgatttggcaagaggaagcagtgcagttgcatctgtattcgct
atcttagaccgaaagactgagattgaacctgagaactctgaagggcttaaagtcacaaag
gttttaaaaggaaatatagagctgaagaatatcttcttttattatccgtctaggcctgat
caagcaatcttccaaggaatgaacctgaaaattgaatctggaaaaacagtagcacttctt
ggacaaagtggttctggaaaatccaccatcattggcttgatagaaagattctatgatcca
ataaagggacaagttctaatcgatgatagagacatcaaaagctacaacttgaagagctta
agatcacatattgctctagtgagtcaagaacccaccctttttgcaggatccatacgcgaa
aatatcatttatggtaaagaagaagctacagactccgaaatcaagaaagctgccattcgt
gctaatgctcatgaatttataagtgctatggaggatggttatgaaacttattgtggtgaa
agaggagcacaactctcaggagggcaaaggcaaagaatagcacttgcacgagcgatacta
aaaaatccaactatacttcttctagacgaggcaactagtgcgctggacagcgtatctgag
aacttggtacaagaagcattggacatgatgatgatcaatagaacaagtgtagttgtagct
catcgcttatcaacgatacagaaggcagacatcatagccgtgattaaaaatggaaaggtt
gtggaacaaggatcacattctcagttgctttcccttggaaagaatggctcttattatgga
ctaatgaagttgcaatctggccattctccttataggtga
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