Solanum dulcamara (climbing nightshade): 129870653
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Entry
129870653 CDS
T09577
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129870653
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129870653
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129870653
03036 Chromosome and associated proteins [BR:
sdul03036
]
129870653
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129870653
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129870653
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129870653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
PDS5
SCD
Cnd1
TAF6_C
HEAT_EZ
HEAT_DAAF5
Adaptin_N
INTS7_N
TPR_TNPO3_IPO13_3rd
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
129870653
NCBI-ProteinID:
XP_055801460
LinkDB
All DBs
Position
10:complement(63573482..63587585)
Genome browser
AA seq
471 aa
AA seq
DB search
MRERDLIDWFVSLVKRLAAGEWFTARVSACGLFHIVYPSAPEMLKAELRSIYSQLCQDDM
PMVRRSAATNLGKFAATIEPAYLKTDIMKIFEDLTHDDQDSVRLLAVEGCAALGKLLESQ
DCVAHILPVIVNFSQDKSWRVRYVVANQLYELCEAVGPEPARTDLVPTYVHLLWDNEAEV
CIAAAGKATKFSQILSPELAIQLVLPHVKELSSDSSQHVRSSLASVIMGMAAVLGKDATI
GHLLPVFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLA
IIEYIPLLASQLGVGFFDDKLGALCKQWLQDEVYSIRDAAANNLKRLAEEFGPEWAMQHI
IPQVLDVINNSHYFYRVTILRAISLLAPVMGSEITCSKLLPVVITAAKDRVPNIKLNVAK
VLQSLIPVVDQSVAEKTIRTSLVELAEDPDVDVRFYASQALQSIDVVMMSS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagggatttgattgattggtttgtctctcttgtgaagaggctggcagctggt
gaatggttcacggctagagtttctgcttgtggactatttcacattgtttacccaagtgcc
cctgagatgttaaaggcagagctccggtccatatatagtcagttgtgtcaagatgacatg
cctatggtgagaaggtcagctgcaacaaacttggggaagtttgctgctaccattgaacca
gcttacctcaagactgacatcatgaaaatatttgaagatcttacacatgatgatcaagat
tctgtacgcttactagcagttgagggctgtgctgcactaggcaagttgctggagtcccag
gattgtgttgcacatattcttcctgtcattgtcaacttctctcaggataagtcttggcgt
gtacggtacgtggttgcaaaccagttgtatgaactgtgtgaagctgtgggacctgagccg
gccaggacggacttggttcctacttatgtgcatttgctgtgggataatgaagctgaagtg
tgtatagctgctgcagggaaagccaccaaattcagtcagattcttagccctgagcttgct
atacagcttgttcttccccatgtgaaggaattgtcatcagactcatcgcagcatgttaga
tcttctttggcttctgttataatggggatggctgctgtcctggggaaggatgcaaccatt
ggacatcttcttccagtttttctttcccttctgaaggatgaatttcctgatgtgcgcctc
aacatcattagcaaacttgatcaagtcaatcaggtgattggaattgatttattatcccaa
tctttgttgccagctattgttgagttggcagaggataggcattggcgagttcgtctggct
ataatagaatacatacctctgttggccagtcagttgggtgtaggattttttgatgataag
cttggcgccctttgcaagcagtggttacaggatgaggtttattcaatcagagacgctgca
gctaataacttaaagcgccttgcggaagaatttggtccagagtgggcaatgcagcatata
attcctcaggttttggatgtgattaataattcacattatttctatcgtgtgacaatactt
agggcaatttctttacttgcacctgtgatgggttctgagataacatgctctaagttgctg
ccggtggttattacagcagcaaaggacagagtgcccaacatcaaacttaatgttgcaaag
gtgttgcagtcccttatccccgttgttgaccaatcagtggcggagaaaacaattcgcact
agtttagtagagctagctgaggaccctgatgtcgatgtccgtttttatgcaagtcaagca
cttcagtcaattgatgttgtcatgatgtcaagttag
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