Solanum dulcamara (climbing nightshade): 129871019
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Entry
129871019 CDS
T09577
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129871019
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129871019
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129871019
04121 Ubiquitin system [BR:
sdul04121
]
129871019
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129871019
Peptidases and inhibitors [BR:
sdul01002
]
Metallo peptidases
Family M67
129871019
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Others
Others
129871019
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
129871019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
129871019
NCBI-ProteinID:
XP_055801854
LinkDB
All DBs
Position
10:complement(49247248..49256714)
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AA seq
237 aa
AA seq
DB search
MAGGVCFQTNVHTVSQTSPSPGISLIHDFPHEAEISSVSSTNSSSGPSNYPHNVQVAFGP
LNDVHIPTSLMENFLEIASDNTKKDIETCGVLGAIIKDDTFYITSLIIPKQESTSNSCQA
VQEEEMFAILHEQSLFPIGWIHTHPSQSCFMSSIDLHTQYSYQVMVHEAIGIVMAPTDTS
RAYGIFRLSDSGMKILKDCLEKGFHLHKEPVDGSPLYGDCSNIYINSCLRLEIFDLR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggctggtggagtatgtttccagactaatgtgcatacagtttcacagacttctccttct
ccgggaatctccttgatacacgattttcctcatgaagctgaaatctcaagtgtctcaagt
actaattcatcaagtggaccttcaaattatcctcacaatgtgcaggtagcatttgggcct
ctcaatgatgtgcatataccaacaagtttgatggagaattttctggaaatcgccagcgac
aacactaagaaggatatagagacctgtggagttcttggtgccatcattaaagatgacaca
ttttatattacctctctaataataccaaaacaagaatcaacctccaattcttgtcaagcc
gtacaagaggaagagatgtttgccatactacatgaacaatccctctttccaattggatgg
attcatacacatccatctcagagctgtttcatgtcatcgatcgacttgcacactcaatat
tcatatcaggtcatggtacatgaggctattggaattgtcatggctcctaccgatacatca
agggcatacggaatattccggctatctgacagtggaatgaaaatcctcaaggactgccta
gaaaaaggatttcatcttcataaagaaccagttgatgggagtcccctctacggggattgc
tccaatatctatattaattcatgtctaagactagagatatttgatttacgatga
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integrated database retrieval system
