Solanum dulcamara (climbing nightshade): 129871139
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Entry
129871139 CDS
T09577
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129871139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129871139
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129871139
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Motif
Pfam:
cNMP_binding
Ion_trans
IQ_SCN5A_C
Separin_C
Motif
Other DBs
NCBI-GeneID:
129871139
NCBI-ProteinID:
XP_055801997
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All DBs
Position
10:9069995..9077502
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AA seq
685 aa
AA seq
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MTSHHELELSNNYSDDDDEDKEEQDNLEEIENDEKEDNNSNDYNICCGHGRDRGGGLTDF
FSWKVIDPRAPWVQEWNRVFLLVCAMGLFVDPLFFYALSISESCMCLFIDGWFAVTVMVL
RCMTDALHLWNMWLQFKMHKSRPYDDEMDDNRINSSRPRLHHDQSLRRFVALRYLKSKKG
FFFDLFVILPLPQIVMWVGIPSLLEKGYTTTVMTVLLIMFLFQYLPKIYHSVCLLRRMQN
LSGYIFGTVWWGIALNLIAYFVASHAVGACWYLLGIQRAAKCLKEQCRVTNGCGLRMLAC
EEQIFYGTSSLVKHKSRIIWGETKIARSTCLASEDNFDYGVYKWTVQLVTNENRFEKILF
PIFWGLMTLSTFGNLESTTDWLEDVFIIIVLTTGLLLVTMLIGNIKVFLHATTSKKQAMQ
LKMRNVEWWMRRRRLPQGFKQRVRNYERQTFAATRGVDECEMISNLPEGLRRDIKYHLCL
DLVRQVPLFQHMDNLVLENICDRVKSLIFTKGETITREGDPVQRMLFIVRGHLQSSQVLR
DGVKSCCMLGPGNFSGDELLSWCLRKPFVERLPPSSSSLVTLETTEAFGLEADDVKYVTQ
HFRYTFVNEKVKRSARYYSPGWRTWGAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSS
LTEDRLRLYTALLTSPKPNQDDFDF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgactagtcatcatgaacttgaactatcaaataattatagtgatgacgatgacgaggac
aaggaagagcaagataaccttgaagaaatagaaaatgatgaaaaagaagataataattct
aatgactacaacatttgttgtggtcatggtcgtgatcgaggaggaggactaacagacttt
ttttcttggaaagtcatagaccctagagcgccttgggttcaagaatggaaccgcgtattc
ttattagtatgcgccatggggcttttcgtggatcctctctttttctacgccctttctata
agcgaaagttgcatgtgtctcttcatcgacggttggttcgcggtaacggtcatggttctt
cggtgcatgaccgatgctttacatttatggaacatgtggttacaatttaagatgcataaa
tcacgtccttacgatgatgaaatggatgataatcgaataaatagtagtcgtcctcgacta
catcatgaccagagtcttcgacgttttgtggccttacgatacttgaaatctaagaagggt
ttctttttcgatctctttgtcatccttcctttacctcagatagtgatgtgggtaggaatt
ccaagtttactggagaaaggatatacaacaacagtgatgacagtattgttaataatgttt
ctatttcagtatttgcccaaaatttatcactccgtttgcctattacgacgcatgcagaat
ctctctggatacatttttggcactgtttggtggggaattgctcttaacttgattgcttat
tttgttgcatctcatgcagtgggagcatgttggtacttgctaggaatccaaagggcagca
aaatgtttgaaagaacagtgcagagttacaaatggttgtggcctaagaatgttggcctgt
gaagagcaaatattttatggaacaagtagtttggtaaagcataaaagtagaatcatctgg
ggagagaccaaaattgcaagatcaacatgtctagcctctgaagacaattttgattatgga
gtttataaatggactgttcaacttgttactaacgagaatcgtttcgagaaaatattattt
cccatcttctggggtctcatgactcttagtactttcggcaacttggagagcacaacagat
tggctggaagatgtattcataatcattgttctcactactggtctacttctggtcaccatg
ttgattggtaatatcaaggtattcttgcatgcaacaacatcaaagaaacaagcaatgcaa
ctaaagatgagaaatgtagaatggtggatgaggagaagaaggttgcctcaaggattcaag
caaagagtcagaaattatgaaaggcaaacatttgcagcaacaagaggagttgatgaatgt
gagatgataagtaaccttcctgagggccttagaagagacatcaaatatcatctttgtttg
gacttggttagacaggttcctttatttcaacatatggataacttggtcctggagaacata
tgtgatcgcgtcaagtccttgatttttacaaagggggaaacaataacaagagaaggagat
ccagttcagagaatgttattcatagtgagaggccatctgcagagcagtcaagtactacga
gacggtgtcaaaagttgttgcatgttaggccccggaaacttcagtggtgacgaacttctc
tcatggtgcctccggaaacctttcgtggagcgtctaccgccgtcctcatcgtcactagtg
actcttgagaccacagaagcgtttggcctcgaagcagacgatgtcaagtatgtcactcaa
cattttcgctacacatttgtgaacgaaaaagttaagagaagcgccaggtattattctcca
ggatggcgaacttggggagctgttgctattcagttggcctggaggagatatagacaccgg
ttgacactcacatcgttgtcgtttattcgaccaagacgaccgttgtctcgatgttcttcg
ttaacagaggacaggctcaggctttatacggctttgctcacttcaccaaagcctaatcag
gatgattttgatttttaa
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