Solanum dulcamara (climbing nightshade): 129871233
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Entry
129871233 CDS
T09577
Name
(RefSeq) EH domain-containing protein 1-like
KO
K12483
EH domain-containing protein 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129871233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129871233
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129871233
Membrane trafficking [BR:
sdul04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129871233
Exosome [BR:
sdul04147
]
Exosomal proteins
Proteins found in most exosomes
129871233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EHD_N
Dynamin_N
EH
MMR_HSR1
EF-hand_7
GTP_EFTU
EF-hand_1
EF-hand_6
NPA
TniB
EF-hand_5
TsaE
AAA_16
Motif
Other DBs
NCBI-GeneID:
129871233
NCBI-ProteinID:
XP_055802109
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All DBs
Position
10:12578737..12585507
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AA seq
545 aa
AA seq
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MEFDASPINRCSKDHEKIYQQWFSLADSDGDGRLTGGDAIKFFATSNLPRQDLKQVWAIA
DSKRQGFLGFREFIAAMQLVSLAQAGHPVSSDLLNAEVDFENLQPPSLEGLDLLQNKKKR
MPKSELEQNGNPTVQSSVTANWFSSSTSVKKVSLSSVTSIVDGLKKLYIQKLKPLEAAYR
FNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLRTSYPGAHIGPEPTTDRFVVVM
NGPDERSIPGNTIAVQANMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGE
KQRTQRSYDFTGVTSWFASKCDLILLLFDPHKLDISDEFKRVIASLRGHDDKIRVVLNKA
DQVDTQQLMRVYGALMWSLGKVLNTPEVARVYIGSFNDKPINEAAIGPIGKELFEKEQDD
LLTDLKDIPKKACDRRINEFVKRARAAKIHSYIISHLKKEMPAMMGKAKTQQKLIDNLED
QFMKVQKEHHLPAGDFPNVEQFREVLSGYNIDKFEKLKPKLIQSVDDMLGYDIPELLKNF
RNPYD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgatgcatctcccattaatcggtgctccaaagatcatgagaaaatctatcaa
caatggttcagtttagcagattcagatggagatggacgtctcaccggaggtgatgccatc
aagttctttgccacgtctaatttgcctcgccaggacctcaaacaggtgtgggcaattgca
gattccaaacggcaaggctttctcggttttagagagtttattgctgcaatgcagttagtc
tctttggcacaagctggccaccctgtaagcagtgatctcttaaatgccgaagttgacttt
gaaaatttgcaaccccctagcttggaaggcctggatttacttcaaaataagaaaaagcgt
atgcctaaaagtgaacttgagcagaatggcaatcctacagtgcaatcttctgttacagct
aattggttttcatcatctacatctgtaaagaaggtctctttaagctctgtcacatcgata
gttgatggactgaagaagttgtacatccagaaactaaagccactggaagcagcatatcgc
tttaatgattttgtttctccattactgacaaatagtgattttgatgccaagccaatggtg
atgcttttgggtcaatactcaacaggaaaaactacattcattaagcatttacttagaacc
agttatccaggtgctcacattggaccagagcctacaacagacagatttgtggttgtcatg
aatggacccgacgaaagaagtattccagggaacacaatcgcagttcaagcaaatatgcca
tttagcggtttgacaacttttggaactgcatttttgtcaaagtttgagtgttctcaaatg
ccgcatcctctgttggagcacatcacatttgtggatactcctggagttctatcaggcgaa
aagcaacgaacacaaaggagctatgattttacgggagtgacgtcttggtttgcttctaag
tgtgatctcattctgcttttgtttgatcctcacaaacttgatataagtgatgaattcaaa
cgtgtgattgcgtctcttcgaggccatgatgataagatacgggtggttttgaacaaggct
gaccaagttgatactcaacaacttatgagggtttatggagcattgatgtggtccctaggg
aaggttctaaatacccctgaagttgcacgtgtctacataggatcatttaatgacaaacca
ataaatgaggctgctatagggccaattggaaaagaactttttgagaaggaacaagatgat
ctccttacagacttgaaagacataccaaagaaggcttgtgatcgtcgtataaatgaattt
gtaaaacgtgctagagctgccaagatacattcttacattatcagtcacttgaaaaaggag
atgcctgctatgatgggcaaagccaagacccagcaaaaacttattgataacttggaagat
caatttatgaaggttcaaaaggaacaccatctgccagctggggatttccctaacgtcgaa
caattcagggaagttctgagtggttataacattgataagtttgagaagttgaagcccaaa
ttgatacaatccgtcgatgacatgcttggttatgacatccctgaacttctcaagaatttc
agaaatccttacgattga
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