Solanum dulcamara (climbing nightshade): 129871452
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Entry
129871452 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129871452
04121 Ubiquitin system [BR:
sdul04121
]
129871452
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129871452
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129871452
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129871452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
zf-ANAPC11
Prok-RING_1
zf-RING_Vps41
zf-Nse
zf-HC5HC2H
A2L_zn_ribbon
Zn_Tnp_IS91
DZR
Zf_IFT144_1st
Motif
Other DBs
NCBI-GeneID:
129871452
NCBI-ProteinID:
XP_055802336
LinkDB
All DBs
Position
10:68889081..68895654
Genome browser
AA seq
312 aa
AA seq
DB search
MSSAGITVADGGAALYFCHKCSHTVTITPSPTGDLFCPTCNSDFVEECEEPDSEPEVFPS
FPDPALLSSILMGSRSYSDSTTGSRVFPYPAIFNSAQNPRQSSFGSDGFNPFDFLQTHLA
SRRANGVSFEFVIDGGNGGSGLQLPANIGDYFIGPGFEELIQNLAENDPNRYGTPPASKS
AVEGLPSIKVDEELMRSELAQCAVCKDDFEMGLDVKQMPCKHVYHKDCIVPWLELHNSCP
VCRYELPTDDSEYENRQRDNDGDSSGGGSASGSGATGRRFTTISLPWPLGSFGSSSSQGG
SESREQQNRESN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgccggaatcaccgttgctgacggcggcgcagcgctgtatttctgccacaaa
tgcagtcacaccgtcaccatcaccccttctccgaccggcgatctcttctgccctacttgc
aacagtgatttcgttgaagaatgcgaagagccggactctgaaccggaagtgtttccgagc
ttcccggacccggccttgttgagtagtatactcatgggttctcgttcgtattctgattct
accaccggttctcgtgttttcccgtaccctgctattttcaactcagcccaaaaccctaga
caatcgtccttcgggtctgatggtttcaacccatttgattttcttcagacccatttagct
tctcgaagagctaatggggttagttttgaattcgtcatcgatgggggtaacgggggtagt
gggttacagttaccggcgaatataggggactatttcatcggacccgggtttgaggaatta
atccagaatttagcggaaaatgatccgaatcgatacggcacgccgccggcgtccaaatca
gcagtggaggggctcccgagcattaaagttgatgaggaattgatgcgttctgaactggca
cagtgtgctgtttgtaaggatgattttgagatggggttagatgtgaaacagatgccttgt
aaacatgtttatcataaggattgtattgtcccgtggcttgagttgcacaattcttgccca
gtttgtcgatatgagttgccaacggatgattctgagtacgagaataggcaaagagacaat
gatggggactcgagcgggggtggttctgcttctggaagtggggcaacagggagaaggttt
actacaatatcattgccatggcctttggggagttttggatcatcatctagccagggagga
tcagagtctcgtgagcagcagaacagggagtcaaattag
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