Solanum dulcamara (climbing nightshade): 129871461
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Entry
129871461 CDS
T09577
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129871461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129871461
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129871461
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129871461
RNA polymerase I system
129871461
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
129871461
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
PylS_N
Motif
Other DBs
NCBI-GeneID:
129871461
NCBI-ProteinID:
XP_055802345
LinkDB
All DBs
Position
10:complement(68059257..68064147)
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AA seq
116 aa
AA seq
DB search
MGSQPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFT
GLISVMDPTRSWAARWLRIARYVPGCYTLAVSEALPEDLQNLCEDEHIPYAPPKRI
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgggaagccaacctgcacaaattccgaccagttttggtcacgaactgagagcttgtctc
cgttgccgtcttgtcaaaacttatgaccagtttagggaatcaggatgcgagaactgtccc
ttcttcaagatggatgaagatcatgagcgtgtagtggactgtactactccaaatttcact
ggtttaatctctgtcatggatccaacgagaagttgggcagctcgatggcttcgaattgca
cggtatgtccctggttgttacacacttgctgtgtctgaggcacttccggaagatttgcag
aatctttgtgaggatgaacatatcccatatgctcctccaaaacgcatctga
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