KEGG   Solanum dulcamara (climbing nightshade): 129871527
Entry
129871527         CDS       T09577                                 
Name
(RefSeq) E3 ubiquitin-protein ligase ATL9-like
  KO
K16282  E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdul04121]
    129871527
Enzymes [BR:sdul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129871527
Ubiquitin system [BR:sdul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    129871527
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-ANAPC11 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_5 zf-RING_UBOX zf-RING_16 zf-Nse zf-C3HC4_3 RINGv zf-RING_Vps41 FANCL_C SLX1_C PHD_NSD Prok-RING_4 RING_XB3-XBAT31 zf_RING_Vps8_fungal zf-RING-like PHD
Other DBs
NCBI-GeneID: 129871527
NCBI-ProteinID: XP_055802436
LinkDB
Position
10:complement(53783739..53784334)
AA seq 173 aa
MAALTRCFFLFYKVYPILFCSWILQVVRFMLLASIVFWNSCRYAIAYYKYKEMFNKKSCK
FVFRRKKRVESIGQGSLDCAICLSEFEHGERGRKLETCKHIFHENCLEKWLMQKDIKASC
PLCRSVIISEEIKEEYRKLEDEGKRDHSFEKELALLLLSILNRGYCHCSFSPF
NT seq 522 nt   +upstreamnt  +downstreamnt
atggcagctctcactagatgtttctttcttttctacaaagtgtatcccattttgttttgt
tcatggattcttcaagtggtaaggttcatgctattggctagtattgtattttggaactcg
tgtagatacgcaatcgcttattacaagtacaaagaaatgtttaacaagaagagttgtaaa
tttgtgtttagaagaaagaagcgtgttgagtccatcggtcaagggtcacttgattgtgca
atatgcttatcagaatttgagcatggagaaagggggagaaaattggaaacttgcaaacac
atattccatgaaaactgcttggagaaatggctaatgcagaaggatataaaagcaagttgt
ccactttgtaggagtgtgattatatcagaggaaataaaggaagagtatcgaaaactagaa
gatgaaggaaaaagggatcatagctttgagaaagagctagctcttctcttgttatctatc
ttgaacagaggatattgccattgtagtttttcccctttttga

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