Solanum dulcamara (climbing nightshade): 129871682
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Entry
129871682 CDS
T09577
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
129871682
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdul01001
]
129871682
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129871682
Enzymes [BR:
sdul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129871682
Protein kinases [BR:
sdul01001
]
Serine/threonine kinases: Other
VPS15 family
129871682
Membrane trafficking [BR:
sdul04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129871682
Autophagy
Autophagosome formation proteins
PI3K complex
129871682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
WD40
VPS15-like_hel
WD40_WDHD1_1st
WD40_CDC20-Fz
HEAT
WD40_Prp19
WDR55
PK_Tyr_Ser-Thr
EIF3I
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
PEP5_VPS11_N
Cohesin_HEAT
TCAD9
APH
Beta-prop_Vps41
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
129871682
NCBI-ProteinID:
XP_055802615
LinkDB
All DBs
Position
10:complement(71777178..71786466)
Genome browser
AA seq
1550 aa
AA seq
DB search
MGNKIAKTTQASAMEYYLHDLPSSYNLVLKEVLGRGRFLKSILCKHDEGLVLVKVYFKRG
DFIDLRDYEQRLSKIRDIFTSLDHPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LCLVEKKWLAFQLLYAVKQSHEHGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGEMHVAQDAPLEPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQHDPSQLLEKIPDSGIRKMILHMIQLDPESRYSAESYLQNYAGVVFP
CYFSPFLHNFYSLLNPLNSDARVLICQTSFHEILKQMMSDKPGDRNPSAVSPHSVPVSQT
RQESDMNENLKLVKDSLNDREEIEKGSVHDRFDLLGNVNTLLRDVKQNNQCPVVKPVLED
IANTAYSQKQRQCHIQSPGEQIPVSSIPFKRSHHPFLKKITMEDLTALMTDYDNQSDTFG
MPFLPLPEDVMSCEGMVLIASLLCSCIRNVKLPFMRRGAVLLLNSCSLYIDDEDRLQRVL
PHVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVR
ICYASNISKLALTAYGFLIHSISLSEAGVLNETNSSQNSSISTSGQPVRPQSLNSDTQLG
QLRKSVAEVIQELVMGPKQTPNIRRALLQDIGNLCWFFGQRQSNDFLLPILPAFLNDRDE
QLRAVFYGQIIYVCFFVGQRSVEEYLFPYIEQALTDTTEAVIVNALDCLAILCKSGFMRK
RVLLEMIDRSFHLLCYPSQWVRRSSVTFIAASSENLGAVDSYVFLVPVIRPFLRRQPASL
ASEKALLSCLKPSVSKELYYQLVENAKSSDMLERQRKIWYNSPPQSKQWETVDLLDRSSS
ELDRMKYWPGRKHYFPGYKSASDLSKPIDFTDFDDNPTKVKSVGSLIQDPSSIMDSGDRL
PSEKLQLSGFVSPQVSGMSSFIDKSSDGIPLYYFKEDNKRLAGTGAAASDSSFPYTSFGF
GSSSLPWMDPVNKSFNLANSVPAPLVSGSISIGNSSTLLRRVVHEVDDREADQTAYVNKF
QDIGSGTSKTGSLTMEDNTAATDRTDLSSFARTSMITDSGWRPRGVLVAHLQEHRSAVND
ISISADHSFFVSASDDSTVKVWDSKKLEKDISFRSRLTYSLEGSRALCITVLQGSAQVVV
GACDGTIHMFSIDYISRGLGNVVEKYSGIADVKKNVVGEGAVASLLNYCSDVGASKMILY
STQNCGLHLLDTRTSSHAWNTKVYPKEGYISSLVAGPCGNWFVSGSSRGVLTLWDLRFCI
PVNTWQYSLACPIERMSLFLPPPSTSLSVAARPLVYVAAGCNEVSLWNAENGSCHQVLRV
ANNENEAENSDLPWALAKPSNKANPKQDLRRNNVSKYQVDELSDPPPRLSGIRALLPLPG
GDLLTGGTDLKIRRWDHCSPERSYCVCGPSIKGVINDDFYETKSSFGVQIVQEAKRRPLA
TRLTVKAILGAAAVDAAGCHRDCILSLASVKLNQRLLISGSRDGAVKVWK
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcaaaaacgacacaagcgtcggcgatggagtattacctccacgac
ttgccgtcgtcatacaatctggtgctgaaagaagttctaggtcgaggtcgctttttgaaa
tcaattctctgcaaacacgacgaaggacttgtgcttgtaaaagtctatttcaaaagaggg
gatttcattgatttacgcgactacgagcaacgtctctccaaaattcgtgatatattcacc
tcccttgatcatccacatgtttggcctttccagttctggcttgaaacagataaagctgct
tatttgttgagacagtacttctttaacaatcttcatgatcgtcttagtacccgacctttc
ctctgtcttgttgagaagaaatggcttgctttccagttgctttatgcagtgaagcagagt
catgaacatggagtgtgtcatggtgatatcaagtgtgagaatgtgctggtcacgtcttgg
aactggctttatcttgcggactttgcgtcattcaaacccacttatattccacatgatgat
ccttctgatttctccttcttctttgataccggtggacgaaggcgatgctatcttgcacct
gagagattttatgagcatggaggcgagatgcacgttgcacaagatgctcctttggagcca
tctatggacatctttgctgttgggtgtgttattgctgagcttttcctcgagggccagccg
ttattcgaattatctcaactgcttgcttatcgcagaggacaacacgatcccagtcaactt
ctggaaaagattccagattcaggaatccggaagatgattcttcatatgattcagttggac
ccagagtcacgatattctgctgaaagctacctgcagaactatgcaggagttgtgttccca
tgctacttctcaccattccttcataatttctattccttgttgaatccccttaattccgat
gcaagggttctgatatgccagacctcttttcatgagatccttaaacaaatgatgagtgat
aagcctggtgacaggaacccctctgctgtgagtccacattcagttcctgtcagtcaaaca
cggcaggagagtgatatgaacgaaaatctgaaattagtgaaggactcattgaacgacaga
gaagagattgaaaagggctcagttcatgatcgctttgatctgcttggcaatgtgaacact
ttgctcagggatgtgaaacaaaataatcaatgtcctgttgtgaagccagtgctggaggat
atagccaatacagcatattctcagaagcaaagacaatgtcacatccaatctccaggtgaa
caaatcccagtaagctccattccgttcaagagaagtcaccatccctttctaaaaaagatc
accatggaagatttgactgcgttgatgactgactatgataatcagtcggacacctttgga
atgcctttcttaccgcttcctgaagatgtaatgagctgtgaaggaatggtgttgatagcc
tcattgttgtgttcctgcatacgtaatgtcaaattgccttttatgaggagaggtgctgta
ttactgttgaactcttgttccttgtacattgatgatgaagatcggttgcagcgagtactt
ccacatgtgatagcaatgctgtcggatccagctgcaattgttcgttgtgctgccttagag
actttatgtgatattcttcctttggttagagattttcctccaagtgatgccaaaattttt
cccgagtatattctccctatgctttccatgcttcctgatgacccagaggagagtgttagg
atttgttatgccagcaatatatcgaagcttgcactaacagcatatggttttctgattcac
tcaataagcttgagtgaggcaggtgttctgaatgaaacaaattcatcccagaattcatca
atatcgacctcaggccaaccagtacggccacagagtctaaacagtgatacgcaacttggt
caattaaggaagtcagttgctgaggttattcaagaacttgtgatgggcccaaagcaaact
ccaaacatcagaagagcactattgcaagatattggtaacctttgttggttttttgggcag
aggcaaagtaatgatttcctcttgcccattctccctgcttttctaaatgatagagatgag
cagctcagggcagtattttatgggcaaatcatatatgtctgtttttttgttggacaaaga
agtgttgaagaatatcttttcccatacattgagcaggcattgactgatacaactgaggct
gtaatcgtcaatgcactagattgcttggccattctctgcaaaagtggctttatgcgcaag
cgggtcctacttgaaatgatagaccgttctttccatttgttgtgctaccctagccaatgg
gtaaggaggtcatctgtcacctttattgctgccagcagtgagaacttaggagcagttgat
tcttatgtttttcttgtccctgtaataaggcccttccttcgcaggcagccagcatctcta
gcttccgagaaagctcttctctcatgtctgaagccatcagtttcaaaagaactgtactat
cagcttgtggagaatgcaaagagttcagatatgctggagagacaaagaaagatatggtac
aattcaccacctcagtcaaaacaatgggaaactgtagatttacttgacagaagtagcagt
gagttggatcgaatgaaatactggcctgggagaaaacattattttccgggttataaatct
gctagtgatttatctaaaccaattgattttactgattttgatgataatccgaccaaggtg
aaatcagtgggaagtttaatacaagatccttcgagcataatggatagcggtgatcgtctc
ccctcagaaaaattacagctatctggctttgtgtctccgcaagtcagtggtatgagcagc
tttattgataaatcatctgatggcattcctttgtactattttaaggaggataacaagaga
ttagcaggcactggtgcagcagcctccgattcctcatttccatatacttcatttggattt
ggttcttcatccttgccttggatggatcctgtgaacaagtcatttaacttggcaaattca
gttccagcacctcttgtgtcaggttcaattagcattggcaatagctccacactgttgcgt
agagttgtacatgaagtggatgacagggaagctgatcaaacagcatatgtgaacaagttt
caggacattgggtccggtacatctaaaacgggttccctaacaatggaagacaacacagcc
gcaacagatagaactgatttgtcatcttttgccagaacatctatgattactgattcagga
tggaggcctcgtggggttttggttgctcacctccaagagcaccgttctgctgttaatgat
atatccatttcagcagaccacagcttttttgttagtgcatctgatgattctactgttaag
gtttgggattcgaaaaaactagagaaggatatctcattcaggtcaaggttaacttattct
ttagaaggaagccgtgctttatgtattacagtgctccaaggttctgctcaagttgttgtt
ggagcatgtgatggaacaatacatatgttctctattgattatatctccagaggactcggt
aatgttgtcgagaagtattctggtattgctgatgtgaaaaagaatgtagtgggagagggt
gccgttgcaagcctcttgaactattgttcagatgttggtgcctcaaaaatgattttgtac
agcactcagaattgtgggctccatctgttggacacaagaacaagctcacatgcctggaac
accaaagtttatcccaaagagggctatatatcatctctagttgcagggccttgtggaaat
tggtttgtatcaggttcctcaagaggtgtacttacactttgggatttgaggttctgcata
ccagttaacacatggcaatattctcttgcctgcccaattgagagaatgtctctgtttctt
cctcctcctagtacctcattgtctgtagcagcaaggccccttgtttatgttgcagcaggt
tgtaatgaagtctctctctggaatgcagagaatgggagctgccaccaggttttgagggta
gcaaacaatgagaatgaggctgagaactctgacttaccttgggctttagcgaaaccatca
aataaggctaatcctaaacaagatctaagaagaaataatgtttcaaagtaccaagttgat
gaattgagtgatccgcctcctcgcctttctggcattcgtgcattgcttccattacctggt
ggtgatttgttaacagggggtactgacttaaaaatacgtcgctgggaccattgcagccca
gaacgaagttattgtgtttgcgggccatctataaagggggttattaatgatgacttttat
gagacaaaatccagctttggcgtacaaatagtgcaggaggcgaagaggcgacctttggcc
accagactaacggtgaaggcaatccttggagctgctgctgttgatgctgctgggtgtcac
cgtgattgtattctctctttggcttcggtcaaattaaatcagagacttctgatatcaggt
agcagagatggagctgttaaggtttggaagtaa
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integrated database retrieval system
