Solanum dulcamara (climbing nightshade): 129871751
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Entry
129871751 CDS
T09577
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129871751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129871751
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129871751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
129871751
NCBI-ProteinID:
XP_055802708
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Position
10:complement(73440936..73450816)
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AA seq
862 aa
AA seq
DB search
MANDVDMSGWSELLHSSSKLLEQAAPSAQFPPLQRNLDQLEALTKKLKAKTLRTEAPTQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATTVEEYLQQIHEMAMVSAVQEA
QKDNLKNFNDYMMKVLENDWKKEKRDFLQSLSRISTLPRTNISESSPLRGRQGQIASLTY
SPQVSSGPSSVEPLALANRSIVDKKAAAYGEVVKNLTSSRERGLPFKPATAFKYALESLG
LYASGGKSVGIQKIWHLLSALMGEDSSVQHNVSKKMSLVIGARHHLEWGHEKYIMETIQA
HPAQAALGGAVGNLQRIRAFLRIRLRDYGVLDFDAVDARRQPPVDTTWQQIYFCMRTGYY
NEAREISLQSRMSHQFAPLLTEWISTGGMVSADMAAVASEECEKMFRLGDRGGRPTYDKK
KLLLYTIISGSRRQIDRFLREFPTLFSTIEDFLWFQLSAVRESPDRSSVVLSEGLAPYTL
DDLQAYLNKFESSHYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKDMGDEGYNVDAVHMAI
VLADYGVLSEGTWVGQKFGVMDAFAEASSIIRQYGSFCLRHGDLLMAFEYYVQAAAAVGG
GQLSWSGRGNIDQQRQRSSMLKQLLTELLSRDGGIDILLGPRGTGEEGQLGRFLTDEKTR
QQFLLEAARQYQDAGLYDKSIEIQKRVGAFSAALDTINKCLSDAICALARGRLDGESRTS
GLILSGNEILEMFKYYPEISPQERENVLAQQIVLRQLEAVLSIHKLARFGNHLDAIKEVA
KLPFLPLDPRTPDFATDIFQNLSHHVQACVPDLLKVALHCLDNVKDTDGSLRALRAKIAN
FLASNLNQNWPRDLYDKVARSL
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgacgtagacatgagtggatggagtgagcttctacattcttcttcgaagctt
ctagaacaagctgctccttctgctcagttccctccgcttcagaggaatttggatcaattg
gaagcattaacgaagaaattgaaagctaaaactttaagaactgaagctccaactcaatct
attgctgcaaccaggcttctagctagggagggcatcaacgcggagcagcttgctcgtgat
ctcaagtcttttgagttaaagacgacatttgaagacgtttttcctgcggaggcaacaact
gttgaagagtatttgcaacagatccatgaaatggcaatggtctctgcagttcaagaagct
cagaaggataacctaaaaaatttcaatgattacatgatgaaagttttggagaacgactgg
aagaaagaaaaaagagacttcctccagagcctaagccgaatttcaaccttacctaggaca
aatatcagcgaatcaagccctttacgtggtcgtcagggacaaattgcatctttgacatat
agccctcaggtttcatctggtccttctagtgtggagcctttagcattagctaataggtcc
atcgttgacaaaaaggctgctgcatatggagaagttgtcaagaatctcactagttcaaga
gagcgtggtttaccctttaaacctgctacagctttcaagtatgctcttgagagtttgggt
ctttatgcatctggtgggaagtcagttggcattcagaagatctggcatctattgtcggct
ctgatgggtgaagattcatctgtccaacataatgtttctaagaaaatgtctttagtaatt
ggagctagacatcacctagaatggggtcatgagaagtacatcatggagacaattcaagcc
catcctgctcaggctgcacttggtggcgctgttggtaatttgcagagaatccgcgccttt
cttaggatccgtctaagggactatggggttcttgattttgatgcggttgatgcccgtaga
cagcctccggttgatacgacctggcagcagatatatttttgcatgagaactggctactac
aatgaagcaagagagatttccctacagtctcgcatgtcccaccagtttgctcctctgctt
acagagtggatttccactggaggcatggtatcagcagatatggcagcggttgcttcagaa
gaatgtgagaagatgtttagattgggtgatcgaggaggtcgacccacgtatgataagaaa
aagttgctactctacaccataatttctggttctcgcaggcaaattgacagatttcttcga
gaattccctacacttttctctactatagaggatttcttgtggttccaattatctgctgta
cgtgagtctcctgacaggtcttctgttgtcctaagtgaagggttggcaccctacactttg
gatgatttgcaagcttacctaaacaagtttgagtcatcacactatactaagaatggaaag
gatcctttggtttatccatatgtcttacttttaagcatccaacttcttccagccgtccta
tatttgtccaaggacatgggagacgaggggtataatgtagatgctgttcatatggctatt
gtcttagcggactatggggtactctctgaaggtacatgggtaggtcaaaaatttggggtc
atggatgcttttgctgaagcctctagcataatcaggcagtatggatcattttgcctgcgt
cacggtgatctgttaatggcatttgagtattatgtgcaagctgcagcagcagtgggtggt
gggcagttgtcgtggagtggacgtggtaatattgatcagcaaaggcaaaggagctcaatg
ttgaaacaacttcttacagagcttttgtcgcgggatggtggtattgatattttacttggt
cccaggggtactggagaagaaggtcaacttggaaggtttttgactgatgaaaagaccaga
caacaatttctgcttgaagctgctcggcagtatcaggatgcagggctctatgacaagtcc
atcgagattcagaaaagagtgggggcattttcagctgcattggatacgataaacaagtgc
ctttctgatgcaatatgtgccttggcacgtggaagattggatggggaaagccggacttct
gggctcattctttcaggaaatgagatcctggagatgttcaaatattaccctgagatcagt
ccccaagagagagagaatgtgttggcacagcaaattgttctaagacagctggaggctgtg
ctatctattcataagcttgcaagatttggaaatcacttggatgctataaaggaagtggct
aaactcccattccttcctttggatccaaggactccggatttcgccacggatatatttcaa
aatttgtctcatcatgtccaagcttgtgtaccagacctcctaaaagttgcacttcattgc
ctggacaatgttaaagacactgatgggtcacttcgtgctttaagggctaagattgcaaac
ttcctcgcaagcaatttgaatcagaattggcctcgtgatctctatgacaaggttgctcgc
agtttgtga
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