Solanum dulcamara (climbing nightshade): 129872008
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Entry
129872008 CDS
T09577
Name
(RefSeq) nuclear pore complex protein NUP58 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129872008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129872008
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129872008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
129872008
NCBI-ProteinID:
XP_055802810
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Position
11:complement(58356990..58364664)
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AA seq
540 aa
AA seq
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MAFSFTPQTQQPSLFQTPGQQQSSPFQTPGQQQSSPFQTPGQQQSSPFQTPGQQQPSPFS
QITPFSQQQQQQQQQQLQFQLQQQQQQQQQLQQQQQHLQLQLQQQQQQLLQQQQSQQQQQ
LYLFTTDKTPATYSTKWEDLHPDSQKLLLQIEERILEYRDESQRLDQCSRLYDSSVSNDG
FELDASRSIQELGGISTSMERQKAILQELMAVVKDMLRNTEVAVRSFMMLRPRFLHHSAP
AAASATAPSQASGATVAPTASSQAQSTPNAPIFDFYSGIPKKPSPFLQQTLARFEKYLGE
CQQWVEELEQLMALDSDRNSTNSSSSLLQSFPKVMSNVHGFFVHVAAKVESIHQYIESMK
TAYLADQRRRGDESDPFLEADRRETAKQEAAAKRVHPTLHLPAISQPSTQVAGLISSSAA
PGVSGTPQTSTAVSSASAGSGFSLFATPSVAASSSSPFTTPTMSAPVSSLFGTSGASPQT
SLFGTLSTSTPAFSTPLFGSTPASGVSTFATPFASGAALASGASFGTQSKTRAKSRTGRR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctctttcactccacagacacaacaaccgtcgctattccaaactccgggacag
caacagtcgtctccattccaaactcccggtcagcagcaatcgtcgccattccaaactccc
ggccagcagcaatcatctccattccaaactcccggccagcaacagccgtcgccattctct
cagatcactcccttttcgcaacagcagcaacaacaacaacaacaacaacttcaatttcag
ctgcaacaacagcaacagcagcaacaacaacttcagcaacaacaacaacacctgcaattg
caattgcaacagcaacaacaacaactgctgcagcaacaacaatcacagcaacagcaacag
ttgtaccttttcaccaccgataagactcctgccacctatagtaccaaatgggaggacctc
cacccggactcgcagaaactcctgttgcaaattgaggagaggatactggaatacagggat
gaaagccaaaggcttgaccagtgtagccgcctttatgattcatcagtgtcaaatgatggt
tttgagttggatgcaagccgcagcattcaggaacttggtggaattagtacatcaatggaa
agacaaaaggctatcttgcaagagctaatggccgttgttaaagatatgctgcgcaataca
gaggttgcggtgcgctcttttatgatgttacgcccaaggttccttcatcacagtgcacct
gctgccgcaagtgctactgctccatcacaggcatcaggtgcaactgtagctccaacagca
tctagtcaagcacagtctacccccaatgcaccaatttttgatttttacagtgggatacca
aaaaagccctctccctttttgcagcaaacactagcaagatttgagaaatatcttggagaa
tgccagcaatgggttgaagaattggagcagttgatggccttagattctgacaggaattct
acgaactccagttcatctttgttgcagtcttttccaaaagtcatgtcaaatgtgcatggc
ttttttgttcatgttgccgcaaaggtagagagcattcatcagtacattgaatcaatgaaa
acagcatacctggctgatcagcgccgtcgaggggatgagagtgatccttttcttgaggct
gatcgacgggaaacagctaaacaagaggcagctgcgaaaagggtacatccaactttgcat
ttgcctgcaatttcacaaccatcaactcaagtagcaggattgatttccagctcagcagca
cctggggtttccggtacaccacaaacgtcaactgcagtttcttctgcctcagctggaagt
ggattctcactctttgctacgccatctgttgctgcttcatcttcttccccgttcactact
ccaacaatgtcagctccagtctcctctttgtttggaacatctggtgcttccccccaaact
tcactctttgggaccttgtctacttcaactccagcctttagcactccattatttggctct
acccccgcttctggagtttcaacttttgcaacaccttttgcttctggggctgcactagca
tcaggggcaagctttgggactcaatcaaagactagagcgaaaagtcgtacaggcagacgc
tag
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