Solanum dulcamara (climbing nightshade): 129872084
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Entry
129872084 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129872084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129872084
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129872084
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
129872084
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
TerY_C
Motif
Other DBs
NCBI-GeneID:
129872084
NCBI-ProteinID:
XP_055802926
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All DBs
Position
11:complement(43729007..43736285)
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AA seq
320 aa
AA seq
DB search
MEYSAHAGINSIIREMTTVSPYFDDLRCQPEVINPPQNEDSTDIGEHMNEPAQHTAKPNV
TVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSSCKPRVHNRCPTCRHELGNIRCLALE
KVAASLELPCKYQSFGCIGIIPYYSKLKHESQCSFRPYNCPYAGSECTAIGDITYLVAHL
KDDHKVDMHMGSTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGLAPVYIA
FLRFMGDDETAKNFSYSLEVGGNGRKLIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFF
SGGDRKELKLRITGRIWKEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaatactcggcacatgcagggattaacagcattataagagaaatgacaactgtaagt
ccttattttgacgacttgcgatgtcaacctgaggtcattaatcctccacaaaacgaagac
tccacggacattggtgaacatatgaatgagcctgctcaacatacagcaaaacctaatgtg
actgtttccagtagtgttcgtgaattattggaatgccctgtatgcttaaatgccatgtat
ccacccatccatcagtgttccaacggtcacacactgtgttctagttgcaaacctagggta
cataatcgttgtccaacatgtcggcatgaacttggtaatatccgatgtcttgctttggag
aaggttgctgcatctcttgaactcccatgtaaatatcagagctttggatgcataggcatc
attccttactacagcaagctaaagcacgagtcccaatgctcattcagaccctataattgt
ccctatgctgggtcagagtgcactgccattggtgacataacttatttagttgcccattta
aaagatgatcacaaagttgatatgcacatgggcagtactttcaaccatcgttatgtgaaa
tcaaatccccatgaagtggaaaatgctacatggatgctcacagttttcagttgctttggt
cagtacttctgtttacactttgaagcatttcaacttggcttggcaccagtttatattgca
tttttacggttcatgggtgatgatgaaacggcaaagaactttagctacagtcttgaagta
ggaggcaatggaagaaagctgatttggcaaggggtaccaagaagcatcagggacagtcac
cgtaaggttcgagacagttttgatggcctcatcattcaacgtaatatggcactcttcttt
tctggtggagaccggaaagaattgaagcttagaattactggtaggatatggaaagaacaa
tga
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