Solanum dulcamara (climbing nightshade): 129872172
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Entry
129872172 CDS
T09577
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
sdul03015
mRNA surveillance pathway
sdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129872172
09122 Translation
03013 Nucleocytoplasmic transport
129872172
03015 mRNA surveillance pathway
129872172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129872172
03041 Spliceosome [BR:
sdul03041
]
129872172
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
129872172
Spliceosome [BR:
sdul03041
]
Common components
Common spliceosomal components
Cap binding complex
129872172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
129872172
NCBI-ProteinID:
XP_055803031
LinkDB
All DBs
Position
11:complement(35400156..35423541)
Genome browser
AA seq
255 aa
AA seq
DB search
MASLFKDLAKISAYRDRRFPGTQEEFEEALLRSITVYVGNMSFYTTEEQVYELFSRAGEI
KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGAYPPVMPPPHYGRH
SGGNHGRGGSYRHGRDYHRKRHREDDHHRPDYPKRTYDRESRRSSDHESRPEKNPRFRES
GDSDEEEDDDRKRRT
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggatttagccaagatttcagcatatagggacagaaggtttcca
ggaacgcaagaagagtttgaagaagctttgttaaggtcgataactgtttacgtggggaac
atgtctttctacacaacagaggagcaagtatatgagctgttctctcgtgctggagagatt
aaaaagatagtgatgggattggataagaattccaaaactccttgtggattctgctttata
atgtactactctagagacgacgctgaagactctgtcaaatatatcagtggaacaattctt
gatgatcgccctatccgtgttgattttgattggggatttcaagaaggtaggcaatggggc
cgtggtaggagtggtggacaggtacgtgatgaatatcgtacagactatgatccaggtcga
ggtggttatgggaaattagtccaaaaggaattggaagcacaaagacagctagtggattat
ggtacaggatcattgggcgcgtacccaccagttatgccgccacctcactatggtagacat
agtggtggaaaccatggtcgtggaggctcttatcgacatggtagagactatcatcgcaag
cgacacagggaagatgaccaccatcggccagattatccaaagaggacttatgaccgcgaa
tctaggagaagctctgatcatgaatctagaccggaaaagaatccacgtttccgtgagagt
ggtgattctgatgaagaggaggatgatgataggaagcggcgtacctag
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