Solanum dulcamara (climbing nightshade): 129872180
Help
Entry
129872180 CDS
T09577
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129872180
Enzymes [BR:
sdul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
129872180
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
129872180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
129872180
NCBI-ProteinID:
XP_055803040
LinkDB
All DBs
Position
11:complement(49162678..49169071)
Genome browser
AA seq
644 aa
AA seq
DB search
MAGPKLGKKSGSKLGKLPTKKKQKKEPLVPKPLEKEELFSDSEGTDGDFQENDGGFDDKE
EQEMNSNSDMSSDVDDPFAADILASGDADDGADVNSDSNVDSDSDADDTDLVRKSKAIDD
ERKREKKDNDLELQLNIKEEADDFRLPTTEELEEETHRPPDLSNLQRRIKEIVRVLSNLK
SLRQEGVTRKDYVDQLKRDLGSYYGYNDFLIEALVELFPPVELIELIEAFEKPRPISLRT
NTLKTRRRDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPVGATPEYMAGHYMLQSASSF
LPVMALAPQENERVVDMAAAPGGKTTYVAALMKNSGIIYANEVKESRLKSLTANLHRMGV
TNTIVCNYDGRELPKVLGQNTADRILLDAPCSGTGVISKDESVKTSKTAPDIQNCSQLQK
ELILAAIDMVDANSKSGGYIVYSTCSIMVDENEAVIDYALKKRDVKLVPCGLDFGRPGFI
RFRQHRFHTSLDKTRRFYPHVHNMDGFFVAKLKKMSNSKSAARSSVQSEEIQGAESIESN
DQQDSEEDDDKHSDKKGIANENGKLKEEVAGDKKRKRDVQNHSVTKGVGQNSGVTENGKA
ENQLVPTKRREKKKPPPREEIAKAREEKRKALREATRKATMKKK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcccaaactcggtaagaaatcgggttctaaattagggaaactgcctaccaag
aagaagcaaaagaaagaacctttggtacctaagccactggaaaaggaggaactttttagt
gacagtgaaggaacagatggcgattttcaagaaaatgatggaggttttgatgataaagag
gaacaggaaatgaactcaaattctgatatgtcttctgacgtcgatgacccctttgctgct
gatatattagcaagtggtgatgctgacgatggtgcagatgttaattcagattcaaatgta
gattctgattctgatgcagatgatactgatcttgtaaggaagtcaaaagctattgatgat
gaaaggaaaagagaaaaaaaggacaatgatttagaactgcagctcaatattaaagaagaa
gctgatgatttcagactgccaacaactgaggagcttgaagaagaaacacatagacctccg
gatctctctaacctccaaaggaggataaaagagattgttcgagtgctttcaaacttgaag
tcattgaggcaagaaggtgtgacacgtaaggattacgttgatcaacttaaaagggacttg
ggttcatattatggatacaatgattttctgattgaagcgttggtggagttatttccccct
gttgagctgattgaacttattgaagcatttgaaaagcctagaccaatttctctacggaca
aacactttaaagactcgcagacgggatttagctggtgttcttcttaacagaggtgtcaat
ttggacccattaagcaaatggtcaaaggttggactagttgtatatgattctcaagttcca
gttggtgccactcctgagtacatggctggtcattacatgctccaaagtgcgagctctttt
ctgcctgtaatggcccttgccccccaggagaatgaacgtgtagttgatatggctgctgct
cctggaggcaaaacaacttatgttgctgcactgatgaaaaatagtggtattatttatgca
aatgaggtgaaggagtcaagacttaaatctctcactgctaatttacatcgcatgggggtg
acaaacaccatcgtctgcaactatgatggaagagagttgcctaaagttttgggtcagaac
actgctgataggattttgctggacgctccctgcagtggcactggggtaatctccaaagac
gagtctgttaaaacttccaaaactgcacctgatatacaaaattgctcacaattgcagaag
gaactaatacttgcagcaattgacatggttgatgccaactcaaaatcaggtggatacata
gtgtattcgacctgctccattatggttgatgagaatgaagcagttatagattatgcactc
aagaagagagatgttaagcttgtgccatgtggacttgattttgggaggcctggatttatt
cgctttaggcagcaccgtttccacacatctttggacaagacaaggcgattctatcctcat
gtgcacaacatggatggattcttcgtagccaagttgaaaaagatgagcaattccaagtct
gctgcaagatcgtcggttcagtctgaagaaatacaaggtgctgaaagcattgagagcaac
gaccagcaggattctgaagaggatgacgacaagcattcagataaaaaaggcattgcaaat
gagaatgggaaattgaaagaggaagtagctggtgataaaaagaggaagagggatgtccaa
aatcattcagttacgaaaggtgttggacaaaacagtggtgtaactgaaaatgggaaggca
gaaaaccaattggtgccaacaaaaaggagggaaaagaagaaaccccctcctagagaggaa
attgcaaaagctagggaagagaagaggaaagctcttagggaagcaacccgaaaagccacg
atgaagaaaaaatga
DBGET
integrated database retrieval system
