Solanum dulcamara (climbing nightshade): 129872212
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Entry
129872212 CDS
T09577
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129872212
Membrane trafficking [BR:
sdul04131
]
Protein recycling
Others
EARP complex
129872212
Endosome - Golgi transport
Tethering complex
GARP complex
129872212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
PWI
vATP-synt_E
Motif
Other DBs
NCBI-GeneID:
129872212
NCBI-ProteinID:
XP_055803087
LinkDB
All DBs
Position
11:complement(62632081..62646774)
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AA seq
696 aa
AA seq
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MVEVAGNTPKPFLDLGSFVGDLNVDDETASDDISLEGLEEELQECQADDVVANILSKGAT
LREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDMILSQMETLLSGFQAEIGS
ISSDIKILQEKSMDMGLRLKNRKVAESKLAKFVEDIVVPPRMIDIIVDEEVNEEYMRTLE
ILSKKLKCADADPTVKTSKALKDVQPELEKLRQKAVSKVFDFMVQKLYALRKPKTNIQIL
QQSVLLKYKYILSFLKEHGKEVYLEVRAAYIDTMNKVLSAQFRAYIQALEKLQLDIATSN
DLIGVETRSTGLFSRGREPLKNRSAVFALGERINILKEIDEPPLIPHIAEASSKKYPYEV
LFRSLHKLLMDTASSEYLFCDDFFGEQTMFHDIFAGPFSVIDEHFGTILPNSFDAIGLML
MIRIIHQHQLVMSRRRIPCLDSYLDKVNIALWPRFKMVFDLHLHSLRNANIRTLWEDDVH
PHYVIRRYAEFSASLIHLNVEYKDGQLELNLERLRMAVDDLLVKLSQMFAKQKLQTVFLI
NNYDMIISVLKEAGPDGGKIQQHFEELLKNNTAIFVEELLLEHFNNLIKFVKTRGSEDPG
TGTERPITIAEVEPIVKDFASRWKAAIELMHNDVITSFSNFLCGMDILRAALTQLLLYYT
RLSDCIKRINGGSTLNKDLVSISSIMYEIRKYSRTF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggtggctggcaacacaccgaaacccttcttggatttgggatccttcgttggc
gatttgaatgttgatgatgaaactgccagtgatgatatatcccttgagggactcgaggaa
gagttacaggaatgtcaagctgatgatgttgttgcaaacatactttctaaaggtgcaaca
ttgcgggaatacactaaaggcgttgaaaataatttgcggcaagttgaattggattctatc
caggattacataaaggaaagtgataatctcgtctcacttcatgatcaaattcgtgattgc
gacatgattctatcccaaatggagactcttctcagtggatttcaggcagagataggttcc
ataagttcagatattaaaattctccaagagaagtctatggatatgggactgaggctgaag
aatcgcaaggtggcagagtcaaaactggcaaagtttgttgaagatattgttgttcctcca
aggatgatagacataattgttgatgaagaggttaatgaggaatatatgaggacccttgag
attttgagtaaaaagctgaagtgtgcagatgcagatcctacagttaaaacatcaaaagct
ctaaaagatgtgcagcctgagctagaaaaacttcggcagaaagcagtctccaaggtgttt
gatttcatggttcagaagctatacgctttaaggaaacccaaaactaatatccagatcctt
cagcagagtgtcctcctaaaatataagtatatcctttccttcctcaaggagcatggaaag
gaggtgtatcttgaggttcgagctgcatatattgacacaatgaacaaggttctaagtgca
cagttccgcgcttatattcaagctttagaaaagcttcagttggatatagcaacatctaat
gatctgataggtgttgagaccagaagcacaggtcttttttccagaggaagagaaccattg
aagaacaggtctgcagtttttgctcttggagaaaggataaacattctcaaggagattgat
gagcctccattaattccacatattgctgaagccagctcaaaaaaatacccgtatgaggtc
cttttcaggagtttgcacaagctgctcatggatactgcttcttctgagtaccttttctgt
gatgatttctttggagaacagaccatgtttcatgatatttttgctggcccgttttcagta
attgatgagcatttcggtacaattcttcctaatagttttgatgcaattggcttaatgctc
atgattcgcatcatacaccagcaccagcttgtaatgtccaggcgccgaattccatgcctg
gattcatacttagacaaggtcaatattgctttatggccacgtttcaagatggtctttgac
ttgcacctccacagcctgcgaaatgccaatatcaggactctctgggaagatgatgttcac
ccgcattatgtcataaggcgttatgctgagttttctgcctcccttattcaccttaatgta
gaatacaaagatggccagcttgaactgaatcttgagagactcagaatggctgttgatgac
ttgcttgtcaagctatcacaaatgttcgctaaacaaaagttgcaaacagtattccttata
aacaactatgacatgataatatcggttctgaaggaagctggtccagatggtgggaaaatc
cagcagcactttgaagagcttctaaagaataacacagccatattcgtggaagaattgttg
ttggagcattttaacaatctcatcaagtttgtaaagacgagagggtctgaggatccaggt
actggcactgaaagacctataactattgctgaagtcgagccaattgtaaaagactttgca
agcagatggaaagctgccattgagcttatgcacaatgatgtgattacttcttttagcaat
ttcctgtgtggtatggacattctaagagctgcattaactcaacttcttctctattatacg
aggctttcagattgtataaagaggataaatggtggttctaccttgaacaaggatcttgtt
tcaatttcatcaataatgtatgagatcagaaaatactcgaggactttctag
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