KEGG   Solanum dulcamara (climbing nightshade): 129872239
Entry
129872239         CDS       T09577                                 
Name
(RefSeq) ras-related protein RABF2a
  KO
K07887  Ras-related protein Rab-5A
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04144  Endocytosis
sdul04145  Phagosome
sdul04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129872239
   04145 Phagosome
    129872239
   04148 Efferocytosis
    129872239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129872239
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdul04147]
    129872239
   04031 GTP-binding proteins [BR:sdul04031]
    129872239
Membrane trafficking [BR:sdul04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    129872239
 Endosome - Lysosome transport
    129872239
Exosome [BR:sdul04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129872239
  Exosomal proteins of other body fluids (saliva and urine)
   129872239
  Exosomal proteins of colorectal cancer cells
   129872239
  Exosomal proteins of bladder cancer cells
   129872239
GTP-binding proteins [BR:sdul04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    129872239
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA AAA_24 AAA_16 ABC_tran TsaE
Other DBs
NCBI-GeneID: 129872239
NCBI-ProteinID: XP_055803131
LinkDB
Position
11:complement(43202057..43210011)
AA seq 200 aa
MATSGNKNMNAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTVAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNSNMVMAL
AGNKADLLDARKVAAEEAETYAQENGLFFMETSAKTASNVNDVFSEIAKRLPRLQPAQNP
SGMVLTDRPAQTPATASCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcaaccagtggaaacaagaatatgaacgccaaattggtgctccttggagatgttgga
gctggaaaatctagtctagttctgcgttttgttaaaggacaatttattgaatttcaagaa
tcaaccataggtgctgcatttttttcccaaacagtagcagtaaatgatgcaactgtaaaa
tttgaaatatgggatacagcaggccaagagagataccacagtctagctccaatgtattac
agaggagctgcagctgctataattgtttatgatataacaaatcaagcatcatttgataga
gcaaaaaagtgggttcaggagcttcaagcacaaggtaattcaaatatggtgatggcactt
gctggaaataaggcagatttgttagatgcaagaaaagttgctgctgaggaagcagaaact
tatgcgcaggagaatggtcttttcttcatggaaacatctgcaaagactgcatctaatgtc
aatgacgttttctctgaaatagcgaagagactgcctcggcttcagccagcacaaaatcca
tctgggatggttcttacggataggcctgctcaaacaccagctactgcttcttgttgctct
taa

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