Solanum dulcamara (climbing nightshade): 129872602
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Entry
129872602 CDS
T09577
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00040
Pentose and glucuronate interconversions
sdul01100
Metabolic pathways
Module
sdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129872602
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
129872602
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
129872602
NCBI-ProteinID:
XP_055803521
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All DBs
Position
11:complement(43306339..43309850)
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AA seq
377 aa
AA seq
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MGCDVEVSQVHCIDSVFNVQNFGAFPDGKTDNNQAFLKAWNQICQSNAGGTLFIPTGTFL
LNAITFNGPCKGPTYFNINGVLRAPIGKCKDEYWILFQHINGLTINGNGSLDGQGPSSWS
LYNANTQNPPASIKFNGMSNALIQDIASINSKFFHFQINNCKGVHFRNVNITAPGDSPNT
DGIHIGNSNDIIINKSNISTGDDCISIGPGSSNIHISEVNCGPGHGISIGSLGKYQNEAD
VNGVIVTNCTIVKTQNGVRIKSWAPSPPSKVYNVTFENIKVNYVKNPIVIDQHYCPHSSC
SNQGDSQVKISDVQFTNIKGTSASKVGVVLDCSKSVPCQGIELKGLDLTFNGQGTTTATC
SNANMTFYGQQTPSHCA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtgatgtagaagtttctcaagttcattgtattgattcagtgttcaatgttcaa
aattttggtgcctttcctgatgggaagactgataataaccaggcatttttgaaggcatgg
aaccaaatatgtcaaagcaatgcaggaggcacactctttattccaacaggaactttcttg
ttgaatgcaataacatttaatggcccatgcaaaggcccaacctattttaacattaatgga
gttttgagagctcccattgggaaatgcaaagatgaatactggatattatttcagcatatt
aatgggctcactattaatggaaatggttctttagatggccaaggcccatcttcatggtcc
ctatataatgccaacacccaaaatcctcctgcgtcgataaaattcaacggtatgagcaat
gccttaatacaagatatagcatcaatcaacagcaagttcttccacttccaaattaataat
tgcaaaggagttcatttccggaatgtgaacataacagcacctggcgatagcccaaatact
gacgggattcatataggcaactccaacgatatcattattaataaatcaaatatttcgacg
ggagatgattgtatttctattggccctggtagttctaatattcatatttctgaggttaat
tgtggccctggacatggcattagcattggaagtttaggaaagtaccaaaatgaagctgat
gtgaatggagttatagtgactaattgtacaattgtgaagactcaaaatggagtaaggata
aagagttgggcaccttcacctcctagcaaagtttacaatgtcacttttgaaaatattaaa
gtgaattatgttaaaaatcctatcgtcattgatcaacactattgccctcactcatcttgt
agtaatcagggtgactcacaagtgaagatttcagatgttcaattcactaacataaaagga
acttcagcttcaaaagtgggagtagtacttgattgcagcaaaagtgtaccatgtcaagga
attgaactaaagggtttagacttaactttcaatgggcaaggcaccactactgcaacttgt
tcaaatgcaaatatgactttttatggacagcaaactccttctcattgtgcttga
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