Solanum dulcamara (climbing nightshade): 129872718
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Entry
129872718 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129872718
KO
K10756
replication factor C subunit 3/5
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03030
DNA replication
sdul03410
Base excision repair
sdul03420
Nucleotide excision repair
sdul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129872718
03410 Base excision repair
129872718
03420 Nucleotide excision repair
129872718
03430 Mismatch repair
129872718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdul03032
]
129872718
03036 Chromosome and associated proteins [BR:
sdul03036
]
129872718
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129872718
DNA replication proteins [BR:
sdul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129872718
DNA Replication Termination Factors
ELG1-RFC complex
129872718
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129872718
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129872718
Check point factors
HRAD17(Rad24)-RFC complex
129872718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
AAA_lid_RFC1
Motif
Other DBs
NCBI-GeneID:
129872718
NCBI-ProteinID:
XP_055803613
LinkDB
All DBs
Position
11:complement(53988951..53992753)
Genome browser
AA seq
758 aa
AA seq
DB search
MEGASTYNRGLQLKISSTMRQRRSGYEPSDTETDWTLEKSPPLEANMKNEKNMDSEEPEP
EEPSVALEKAKDNNSFNLSWRTTVPSAARRRTTKSPYRPRRDMDDGEFHSSPKALPRSVS
TFSRRPDHSYSRRNISPFQKSENHRHISPYKYAGDDHEGIFAESNRKKNQSQGNNNVHSR
LGEKSNYNRRYASAPRPDRQHKFDASKERRKANNKTPSQLPVRSLSRKERETPSKHGPTG
GEINEMIAEAKISGSTTGANRMFESTETVSPGDVFFSRDYEALNMQKITERKFDKKPQAL
TDRNVESVQTPADFNQSGRRNLSSSTMTQRTIRTSTFVSRQSSNLSDASGRTTKSMRNFT
ANRQKSQSEAWFGCIKKGACRSSRRESPEKGRQIDEALVIAKASVLQSLRPFWADKHQPS
SLEGFTCHKQEALLLKDLVSSNEILPQILFKGPPGSGRRSLTMALLREIYGDAICNETRP
VQVVVPVSSSPHHIELNVQLEPNARYVIMALVKQVTSEYALTPEISRVNKKADYKVIVLY
NLDKAAENIQHLVKWIMDCYSDACKLILCCEDDVAILDSVKSRSKVFEVAAPVTHEIMEV
LIQIARKEAFELPMGFAAKIAAKSKQNMRRAIMALEACKAHNYPFAEDQPISMGWEEVVT
ELAAEILADPNQTRLFSVRGKFQKLLVEFVHPKLILLKLVEEFIKRVDASIRREIHYWHA
YYEKRLPLGTTALLKLEEFVVKFMSIYRKNLSNRQQFL
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcttcaacgtataacagaggtttacaactgaaaatctcgtcaaccatgagg
caaagaagaagtggttatgagccatcagatacggagacagactggacgttggagaagagt
ccacccctggaagcaaatatgaagaatgaaaaaaacatggattctgaagaacctgaaccg
gaagagccaagtgtagcattggagaaagcaaaggataataattcttttaatttaagctgg
aggactactgttccaagtgctgctagaaggagaactactaagtctccttataggcctcgc
agagatatggatgatggtgaatttcattcttctcccaaggctttacccagaagtgttagc
acattttcacgcaggcctgatcattcatattctcgtagaaatattagtccttttcaaaaa
tctgagaaccatagacatatatctccatataaatatgctggtgacgatcatgaggggatt
tttgctgagtcaaataggaagaaaaatcaatcacaaggtaataataatgttcatagtaga
ttaggggagaaatcaaattataatcgaaggtacgcttctgctcctagacctgatagacaa
cacaagtttgatgcgtccaaggagcgaaggaaagcaaataataagacaccatcccaattg
ccagttaggagcttatcgcggaaagaaagggaaactccgagtaaacatggacctacagga
ggtgaaattaatgaaatgattgccgaagcaaagatttctggaagcactactggtgctaat
cgtatgtttgaaagcacagaaactgtttcacctggtgacgttttcttttctcgggactat
gaagccttgaacatgcagaaaattactgaaaggaaattcgataaaaagcctcaggcactg
actgatagaaatgttgaatcagtgcaaacacctgctgatttcaatcagagtggaagaagg
aatttatctagtagtactatgactcaaagaactataaggacaagcactttcgtaagtagg
cagagcagtaatttgagtgatgctagtggaaggacaactaaaagtatgagaaatttcacc
gcgaacaggcaaaagagtcaatcagaagcatggtttggttgtatcaagaagggagcttgc
agaagttcaagaagagaatctccagaaaaagggcgtcagattgatgaagctttagtaatt
gccaaggcatctgtacttcaaagcttgagacccttctgggctgacaagcatcaaccttct
tcactggaaggatttacatgccataagcaagaagctctactacttaaagacctggtttct
tcaaatgaaatccttccacagatcttattcaagggacctcctggttctgggaggagatca
ctcacgatggctcttttgcgtgaaatctatggagatgcaatctgcaatgaaacaaggcca
gtgcaagttgttgtaccagtaagctcaagtcctcaccatatcgagctcaacgttcagttg
gagcctaacgctagatatgtgataatggctttagttaagcaagtaacttcagagtatgcg
ctgacccctgaaatcagcagagtaaataagaaggctgattacaaagtaatagttctttat
aatctggacaaagcagctgagaacatacagcacctagttaaatggataatggactgctat
tcagatgcttgcaaactcattctctgctgtgaagatgatgtagccatacttgactcggtg
aaaagccgaagcaaagtttttgaagttgcagctcctgtaactcatgaaatcatggaagtt
cttattcagatagcaagaaaggaagcttttgaactaccaatgggctttgctgctaagata
gcagccaaatcaaagcaaaacatgcggagagcaattatggctcttgaagcctgcaaagca
cacaactatccttttgctgaagaccaaccaatttcaatgggatgggaagaagtagtaaca
gaacttgcagcagaaattctagctgatcccaaccaaacaaggttattttctgttcgaggg
aaattccaaaaacttttggtggagtttgtgcatccaaaacttattctcctgaaactagtt
gaagaattcattaagagggtcgatgctagtataagaagggaaattcattactggcatgct
tattatgagaaaaggctcccccttggaacaactgctttgttaaaattagaagaatttgtg
gtcaaatttatgagcatatacaggaaaaatttaagcaaccgtcagcagtttttataa
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