KEGG   Solanum dulcamara (climbing nightshade): 129872818
Entry
129872818         CDS       T09577                                 
Name
(RefSeq) cullin-3A-like
  KO
K03869  cullin 3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129872818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdul04121]
    129872818
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129872818
Ubiquitin system [BR:sdul04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     129872818
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     129872818
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 WAC_Acf1_DNA_bd DUF4962
Other DBs
NCBI-GeneID: 129872818
NCBI-ProteinID: XP_055803681
LinkDB
Position
11:complement(60341663..60345899)
AA seq 733 aa
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVSTMTSHLKEIAKHIESTQGGLFLEELNRIWTEHNKALQMIRDILMYM
DRTFIPSTHKTPVYELGLNLWRDHIIHSSKIHKRLQDTLLELVQHERTGEVINRGLMRNV
IQMLMDLGSSVYQEDFEKPFLDVSADFYRLESQQFIECCDCGDYLKKAEKRLNEEIERVS
HYLDSKSEPKLTNVVEKEMIENHMHRLVHMENSGLVNMIVNDKYDDLGRMYNLFRRVSTG
LALIRDVMTSHIREIGKQLVTDPEKLKDPVDFVQRLLDEKDKHDKIISSAFNNDKTFQNA
LNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVTEEDVEIVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFHA
AVGAEIAEGPSLTVQVLTTGSWPTQSVTTCNLPSEILGVCDKFKSYYLGTHTGRRLSWQT
NMGTADLKATFGKGQKHELNVSTYQMCILMLFNNTDRLSYKEIEQATEIPAADLKRCLQS
LACVKGKNVLRKEPMSKDIAEDDAFYFNDKFSSKFYKVKIGTVVAQKESEPEKQETRQRV
EEDRKPQIEAAIVRIMKSRRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLE
RDKTDRKLYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagtgcacagaagaaaagaaatttccagatagaggcatttaagcatcgggttgttgtg
gatccgaagtatgctgaaaaaacttggaagatccttgagcatgcgattcatgagatttac
aatcataacgccagtggtctaagttttgaagagctctatagaaatgcatataacatggta
ctacacaaatttggggagaagctctattcaggacttgtgtcaactatgacatcacatttg
aaggaaattgcaaaacatatcgaatctactcagggagggttgtttcttgaagaactgaat
cggatatggacagagcataacaaggcactgcaaatgattcgagatatattgatgtatatg
gatagaactttcattcccagtacacataaaacacctgtatatgagcttggtttgaattta
tggagagaccacatcatccactctagcaaaatccacaaaaggcttcaggacacacttctt
gaacttgttcagcatgagaggaccggtgaagtgataaacaggggtttgatgaggaatgtg
atacaaatgctaatggatttaggttcttcagtataccaagaagactttgaaaagccgttt
cttgatgtctcggctgatttctatcgtctggagtctcagcaattcattgagtgctgtgat
tgtggagattatctgaagaaagctgagaaacgtctcaacgaagagattgaaagagtgtcc
cactatttagattcaaaaagtgaacccaaacttactaatgtcgtggagaaagagatgatt
gaaaaccatatgcataggttggttcatatggagaactcgggcttagtgaatatgatcgta
aatgacaagtacgacgatttaggaaggatgtacaacttgttccgaagagtgtcaactgga
cttgcactgattagagatgtcatgacttctcacattcgagaaattggtaagcagcttgtc
actgatccagaaaagttgaaggatcctgtagactttgtgcagaggcttttggatgagaag
gataagcatgataagatcattagttcagcatttaacaatgacaaaacattccagaatgca
ctcaattcctcatttgagtacttcattaatctgaatccacgatcaccagagttcatctct
ttgtttgtggatgacaaacttcgaaaagggctgaaaggggttactgaggaggatgtagag
atcgtattagacaaagtgatgatgctcttccgctaccttcaggagaaagatgtgtttgag
aagtactacaagcagcacttggcaaagaggctactctcagggaagacggtatctgatgat
gcagagagaagtttgatagttaagcttaaaacagaatgtgggtaccagttcacctcaaaa
ctggaaggcatgtttactgatatgaagacctcacaagatacaatgcagggttttcatgct
gctgtgggtgctgagattgcagagggtccttcacttactgtccaggttcttactactggg
tcctggccaacacagtctgttactacttgcaatcttccttcggaaatattaggggtctgt
gataagttcaagtcatactatctggggacccatacgggtaggaggctgtcatggcagaca
aatatggggactgctgatctgaaagctacatttggaaagggacagaagcatgagcttaat
gtttccacttatcagatgtgcatccttatgttgttcaacaataccgatcgattgagttac
aaagaaattgaacaggctacagaaataccagctgcagacttaaagaggtgcttacaatct
ctcgcttgtgtcaaggggaagaatgttctgaggaaggagccaatgagcaaggatattgct
gaagatgatgccttttacttcaatgacaaattctcgagcaagttctacaaggtaaaaata
ggtactgttgttgcacaaaaggagtcagagcctgagaaacaggagactaggcagagagtg
gaggaggaccgaaaaccacagattgaggcagcaatagtcagaatcatgaaatctcggagg
gtgctagatcacaacaatatagttgctgaagtaacgaagcagctgcagtctcgattcctg
ccaaacccagttgtcataaagaaacgaattgagtctttgattgagcgtgaattcttagag
agggataaaacagataggaagttgtatcgttatctggcttga

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