Solanum dulcamara (climbing nightshade): 129872859
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Entry
129872859 CDS
T09577
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129872859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129872859
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
129872859
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129872859
Prokaryotic type
129872859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
129872859
NCBI-ProteinID:
XP_055803773
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Position
11:complement(3006142..3015267)
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AA seq
320 aa
AA seq
DB search
MASPSSKTLMDLFKQPAAKRLKQVSSTENFISSAFPTSSSRKDSDEDPKVVVSPTPEQKS
RMEFNRSLAKAKRNLKLCSDKISKLNANGEGGGYVKLQELLIEETWLEALPGEFQKPYAG
NLCKFVEKEISGGVPIYPPLHLIFNALNTTSFDRVKAVIIGQDPYHGPGQAMGLSFSVPK
GVKVPSSLMNIYKELKQDLGCSIPLHGNLEQWAVQGVLLLNSVLTVRHHQANSHANKGWE
QFTDAVIKTISQKKEGVVFILWGNYAQAKARLVDETKHHILKSVHPSGLSANRGFFGCRH
FSQTNQLLEKMGMPPIEWQL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccttcatccaaaaccctaatggatctattcaagcaaccagcagcaaagcgc
ttaaaacaggtctcttccaccgaaaacttcatttctagcgccttcccaacttcatcatca
cgtaaagacagtgacgaagaccccaaagtcgtagtatccccaacgccggagcaaaagtcg
agaatggagttcaacagatcactcgcaaaggccaaaaggaacctcaaactatgttctgat
aaaatctccaaattaaacgcaaacggtgaggggggtggatatgtgaagttacaggaactg
ttgattgaggagacatggttggaagcactgccaggggaatttcagaagccctatgcaggg
aatttgtgcaaatttgtggaaaaggaaattagtggtggtgtcccaatttatcctccacta
catctgatttttaatgctcttaacactacttcatttgacagggtgaaggctgtcatcatt
ggacaggatccatatcatggaccaggtcaggcaatgggcctctccttctcggtgcctaag
ggtgtcaaagtcccttctagtctgatgaacatatataaagaacttaagcaagatttgggc
tgttcaataccccttcatggaaatctggaacaatgggctgtacagggtgttctgcttctc
aattctgttctaacagttaggcatcatcaggcaaattctcatgcaaataaaggctgggag
caatttacagatgctgtcatcaaaacaatttctcagaagaaagaaggagttgttttcatt
ctgtggggaaactatgcccaagcaaaagctaggttagttgatgaaacaaagcaccatatt
ctcaaatcagttcacccttctggtttgtctgcaaacagaggcttctttggatgtcggcat
ttttcacagacaaaccaacttttggaaaagatgggaatgcctcccattgaatggcaacta
taa
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