Solanum dulcamara (climbing nightshade): 129872864
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Entry
129872864 CDS
T09577
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129872864
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129872864
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
129872864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
Rtf2
Rota_NSP3
mTERF
zf-C3HC4_2
Prok-RING_4
RING_XB3-XBAT31
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
129872864
NCBI-ProteinID:
XP_055803780
LinkDB
All DBs
Position
11:complement(56025963..56032949)
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AA seq
386 aa
AA seq
DB search
MELSTIKDAFDRVTKKQKVASSKSQEVMEQIGHEIEQALLRIQSANDTASLSEHKVILSE
LKAKLKEVAPLSQLEGTQKELNVALSKYPKLLEKSLNPDISKAYRNVGSDIHTVNQIIAS
HFYREGHFDLGDCFVNEARESEAAGQKSPFLQMYQILEAMRSRNLEPALSWATTNSEKLK
LSGSDIEMKLHRQQFVEILQKRGRDGALNYARTFFPPFATKYLAEIQKLMACLLWAGKLE
SSPYSDLLSPFHWDKLAEELARQFCNLMGQSYESPLSVTIAAGVQGLPTLLKLMNVMTGK
KQEWQSMKQLPVPVDLDREFQFHSIFVCPVSRDQATEENPPMLMSCGHVLCKQSITKLSK
NNNTRPFKCPYCPTEVEVGQCRQLFF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagtaccattaaagatgcatttgatcgtgtcacaaagaagcaaaaggttgca
tcatcaaaatctcaagaagtgatggagcagatcggtcatgaaatagaacaagcactgttg
agaatacaatcagcaaatgatactgcatctttgagtgaacacaaagtgattcttagtgaa
cttaaagccaagttgaaggaagttgctccactcagtcagttggaaggaacacaaaaagaa
ctaaatgttgcactaagcaagtacccgaagctccttgagaagtcactcaatcctgatata
tcaaaggcttacaggaatgttggttctgatatccatactgttaaccagataattgcaagc
catttctaccgggaaggccactttgatcttggtgattgtttcgtaaatgaggccagagaa
tctgaagctgcaggccagaaatctccttttctgcaaatgtatcaaatacttgaagccatg
aggtctaggaacctagagccagctctgagttgggccaccacgaatagtgagaaacttaag
ctgagtggatctgatattgaaatgaagctacacaggcagcagtttgtggaaattctgcaa
aaaagaggtagagatggagctttaaattatgctagaactttcttcccaccttttgccacc
aaatatttggcagagatccagaagctcatggcctgtctattatgggctgggaaactggag
tcctcaccgtactcagatttactatcacctttccactgggataaattggctgaagagctt
gctcggcagttctgtaatctcatgggtcaatcctatgagagtccgttgagtgtgaccatt
gcggcaggcgtccaggggttgccaacccttctgaaactgatgaatgtgatgactgggaaa
aagcaggaatggcaatccatgaaacaattacctgtgccagtagacttggacagagaattt
cagttccactctatctttgtctgtccagtgagtcgggatcaggcaactgaggagaatccg
cctatgctgatgtcttgcgggcatgtgctatgcaagcaatctattacaaaactgtcaaag
aataacaacacacggcctttcaagtgtccttactgccccacggaggttgaggtcggtcag
tgtagacaattgttcttctag
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