Solanum dulcamara (climbing nightshade): 129872888
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Entry
129872888 CDS
T09577
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03440
Homologous recombination
sdul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129872888
03460 Fanconi anemia pathway
129872888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129872888
03036 Chromosome and associated proteins [BR:
sdul03036
]
129872888
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129872888
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
129872888
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
129872888
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
129872888
FA (Fanconi anemia) pathway
Downstream FA components
129872888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
129872888
NCBI-ProteinID:
XP_055803810
LinkDB
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Position
11:complement(825086..838578)
Genome browser
AA seq
1135 aa
AA seq
DB search
MPTWQLYSVSVNDFRWKVSDGESLTGAIEEPSLTLASQQLQSMPDLLRQGSSRLAGSSDA
SSTEFPVFRTGSGKPVAVKQSSILRALSILGDEEKADLDTGIGTGRENGLGFQEAVFHKG
SGKALNAPESFCPSSLEKQFSMSNSLFQTGSGKAVNISSTGLNRAKVLLRLEENGDHETF
PGSGKKNRTSEELFGFWNSFPFVEVEGIASTGSTNVSAASLSPIDVKFNSSVCPAEELVA
DFLHSADKPPPIKFHTAGGRSISVSCEALKRARSLLGDLEMGCLVDEKDEADPLFSLSKG
QISVDQVSTKELNSDTPVFLLSAAKDSGPSSLFTSPLRSTLYHKNSSIKTKNLVPASNLI
KEFDAVAKESTSRLDHNIPQNGEPFNKNSATMDLRENDIASKPKLLERPSRGPLVDISNS
IGAGFADRNQNFGRKRKLSGSFVSPFKKPRSTNGVNPLKRNDSGAANGFSDLASKLPSQK
GKVSGRYPFHVARLYMKEYLGKPPSILSKLESLPDDVRRMNPATAETYVFNDKSCSGCIG
VESFLEMLSQSGASMQYVSKKWISNHYKWIVWKLAAYERCYSAKFSGKLLTICNVLEELK
YRYEREVNHGHRSAVKRVLEGDVPPSSMMVLCVSNIYSICVSPVGPQSSLSSTTENGTCA
KVELTDGWYSIIAVLDIQLSKKLAAGKLFVGQKLRIWGAGLCGCTGPVSPLEASGTTSLL
LHINGTYRAHWASRLGFCKGGGIPLSFMSIKDGGGAVPVTLVGISRIYPVLFRERLSNRG
FVVRSERMEAKEMQYFNERRSSIVEGVVSESQREKRDAYIGNDYESKEGARILRILERAA
EPELLMAEMTSEQLNLFSSYQAKLEALRQSDLQKSLEKALQVAGFAERDVTPFMRVRVVG
LISKSTPLKCFPKEGLITIWNPTEKQQCELAEGQAFSVTGLTPISSDSNTLYLQTKGSIA
KWLPLSPLAVEHFEDFFCPRQSISLSKLGEVPMSREFDIAAVVVFVGQLYTEAHQTKQWV
FVADGSKAMLDSDDKSETLMAISFTSPCIETDSFAPINSNLVESTVCFCNVIKRARDNVN
NLWVAEATENSTYYLNYDHSHCSHLKDAGASAERWAKISGLRLEKLRGRVLSIIS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtggcagttgtactccgtctccgtgaatgatttccgatggaaagtctcggat
ggagagtctctaaccggagccatcgaagaaccgagcttaaccctagcttcccagcagctc
caatccatgcccgatctcttgcgtcaaggaagttcgagattagcagggagtagtgatgca
agttctacagaatttccagtctttcgaactggatctgggaaacctgtggcagtgaaacag
tcttcgatattgagagctctttccatccttggtgacgaagaaaaggcggatttggacaca
ggcataggaactggaagagaaaatggtcttggttttcaggaagctgtgttccataaaggc
tcagggaaagctcttaatgctccagaatctttttgtccttctagcttggagaaacaattt
agcatgtcgaactccttgttccagacaggctctggtaaagcagtcaatatatcttccaca
ggtcttaatagggccaaggttttgttgcgcttggaagaaaatggtgaccatgaaacattt
ccaggttctggaaagaaaaatagaacttcagaagagctctttggtttttggaattcattt
ccttttgtggaagtagagggcattgctagcacagggtctactaatgtttcagcagcttca
ttgtctccgattgatgttaaatttaactcctcagtttgtccagcagaggagttagtagcg
gattttctgcattctgcagataaacctcctccaataaagtttcatactgctggtggtaga
tcaatatcagtttcctgtgaggcattgaaacgcgcacggagtctgcttggagatctagag
atggggtgtcttgtagatgaaaaggatgaggctgatccattgttttctttatcgaaaggc
caaatatctgttgatcaggtctccaccaaagaattgaactctgatactcctgttttcctc
ttatcggcagcgaaagacagtgggccctcaagcctttttacatcgccattgagatcaact
ttgtatcataagaactcttcgattaaaacaaagaatctcgttccagcaagtaacttgata
aaggaatttgatgctgtggcaaaagaaagcacaagtaggctggaccataatattccacag
aatggagagccattcaataagaactcagcaactatggaccttagagaaaatgacatcgct
tcaaaacctaaattgctagaacggccttccaggggtcctttggtggatatctcaaatagc
attggagcaggatttgcagatagaaaccaaaactttggtcggaagaggaaactcagtgga
agttttgtttctccatttaagaagcctcgaagcaccaacggcgtcaaccctctcaaaaga
aacgattccggtgctgctaacgggttctcagatttagcatcaaaattaccctctcaaaag
ggaaaggtttcaggtagatatccattccatgtggcacgattgtatatgaaggagtatctt
ggaaagcccccatcaatcctgagcaagctagagagtttgccagatgacgtgagaaggatg
aatccagctactgctgagacttatgtgttcaatgataaatcttgctcaggttgcattgga
gtagagtctttcttggagatgctgtctcaatcaggagcttccatgcaatatgtttctaaa
aagtggatttcaaatcactataagtggattgtttggaaacttgcagcttatgagaggtgt
tacagtgccaaattttccgggaaacttctgacaatctgcaatgtacttgaagaattaaaa
tacagatatgaacgagaagtaaatcatggtcatcgatctgcagttaagagagttttagaa
ggagacgtcccaccttcttctatgatggtactctgtgtttccaatatctattcaatttgt
gtctccccagttggacctcaatcttcactatctagcacgaccgaaaatggaacttgtgca
aaagttgaactgacagatgggtggtattcaataattgctgtcttagatatacaactatcc
aagaagttggctgctggaaagctgtttgttggccaaaagcttaggatctggggagctgga
ttgtgtggctgcacaggtcctgtttcacctcttgaggcgtcagggacgactagtttactg
ctgcatataaatgggacatatagagctcattgggcatctcgtttgggcttctgtaaaggt
ggtggtattccattatcatttatgtcaatcaaggatggtggaggtgctgttccagtaaca
ttggttggaatttcaaggatatatcctgttctcttcagggaaaggttaagtaatcggggg
ttcgttgttagatctgaacggatggaagctaaagagatgcagtattttaatgaaagacgt
agtagcattgtggagggagtagtctcagaatctcaaagagaaaagagagatgcctacatc
ggaaacgactacgaaagtaaagaaggggcaaggattttgaggatactcgagagagctgca
gaaccagaacttctgatggcagagatgacttcagagcagttgaatttattttcatcctat
caagctaagttggaggcattgagacagtctgacctgcaaaaatctcttgaaaaagctttg
caagttgctggatttgctgaaagagacgtcactccgtttatgcgagttagagttgttgga
ttgattagcaaaagcacaccattgaagtgctttccaaaggaaggcttaattacaatatgg
aatcctactgagaaacagcaatgtgagcttgcagagggtcaagctttttctgttacaggg
cttacaccgataagctcagactctaacaccctttacttgcaaacgaaaggatccatagcc
aaatggctgcctttgtctcctctggcagttgagcattttgaggactttttctgtcctcgc
caatcaatttcattgagtaaattgggtgaagttcctatgtccagggagtttgatattgct
gcggtggttgtttttgtggggcagctgtatacagaagctcatcaaacaaaacaatgggta
tttgtagctgatggatccaaagctatgttggattccgatgacaaatcagaaaccttgatg
gccatcagtttcacctcaccatgcatagaaactgattcatttgcaccaataaactccaac
cttgtagaatctacagtttgtttttgcaatgtcatcaagagagctagagataatgttaat
aatctctgggtagccgaagcaaccgaaaattcaacctattatttaaattatgatcattca
cattgttctcatctaaaagacgctggtgcttctgctgaaagatgggcaaagatatctggt
ttgagacttgaaaagcttaggggaagagttctatctataattagctga
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