KEGG   Solanum dulcamara (climbing nightshade): 129873081
Entry
129873081         CDS       T09577                                 
Name
(RefSeq) autophagy protein 5
  KO
K08339  autophagy-related protein 5
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04136  Autophagy - other
sdul04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    129873081
   04136 Autophagy - other
    129873081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129873081
   03029 Mitochondrial biogenesis [BR:sdul03029]
    129873081
Membrane trafficking [BR:sdul04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    129873081
Mitochondrial biogenesis [BR:sdul03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    129873081
SSDB
Motif
Pfam: ATG5_UblA ATG5_HBR ATG5_UblB DUF7992 FbpC-like_RD
Other DBs
NCBI-GeneID: 129873081
NCBI-ProteinID: XP_055804058
LinkDB
Position
11:30802768..30821575
AA seq 369 aa
MESKGGGTEAQKYIWEGAIPLQIHLHESEVTTLPPPPPAMILAPRIGYLPLLAQKIKPFF
SNSLPPGVDTIWFEYNGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILTPCES
EDSVKWSFINSFKEAAYIINGNCKNVMNMSQSDQLELWRSIMDGNLDSYLRVSSKLKLGI
VVDDFSIQLNISSPKSPESTQNADGTAPAKTGRIPVRLYVRTINEDFDELEEAPVVDSWD
KISYINRPVEIHGDGKCFTLYDAITKLLPEHFWGKLPPKDDVSKEEVEVGQRLSPEETNK
SSTEQSGEMLNEHIVSCSVSDGAEIKLLRIQGIEPKMEIPFAWVVNNLMNPEYFLHICVY
VKIQEPITI
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggaaagtaaaggaggaggaactgaagcacagaaatatatatgggaaggagcaattcct
ctgcagattcatcttcatgaatccgaagtcactactctccctcctcctccccctgctatg
attctagctcctcgaattgggtacctgcctcttttagctcaaaaaataaagcctttcttc
agtaattcacttcctccaggtgtagataccatttggtttgagtacaatggcttgcctctc
aaatggtatatacctactggggtactctttgatcttctttgtgcagaacctgaacggcct
tggaatctaacggtacattttagaggatatcctggaaatattttaacaccctgtgaaagc
gaagatagtgtaaaatggagctttatcaattcatttaaagaggcagcatatataatcaat
ggaaactgcaaaaatgtaatgaatatgtcccaatctgaccaattagaactctggcgctcc
attatggatggtaatttagactcttatcttcgagtctcatctaagcttaaacttggcata
gttgtggatgatttttcaatacaattgaacatttcctctcctaaatcaccagaaagcact
caaaatgcagatggcacagcaccagctaaaacaggtagaataccggttcgactgtatgtt
agaactatcaatgaggattttgatgagttagaagaagcaccggttgttgatagttgggac
aaaatctcttacataaacagacctgttgagatccatggagatggcaaatgcttcaccttg
tatgatgccataacaaaacttctgcctgagcatttttgggggaaacttccgccaaaagat
gatgtatctaaagaagaagttgaggttggacagagattatctcctgaagaaacaaacaag
agcagcacggaacaaagtggggaaatgttgaatgagcacatcgtctcctgctctgtttca
gatggtgctgagatcaagctcctgcgcattcagggaattgaaccaaagatggagattcct
tttgcatgggtcgtaaacaatttgatgaaccctgaatactttcttcatatctgtgtgtat
gtcaaaattcaagaacccatcaccatatag

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