Solanum dulcamara (climbing nightshade): 129873138
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Entry
129873138 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129873138
KO
K18735
protein SMG9
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129873138
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129873138
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
AAA_18
AAA_16
RsgA_GTPase
MeaB
AAA_30
Dynamin_N
FeoB_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
129873138
NCBI-ProteinID:
XP_055804141
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Position
11:62779722..62783834
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AA seq
404 aa
AA seq
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MAGSGGNLSSNQSSVSHQAPKILLAKPGLVTAGKFNRGGPDDDSTAHRPRLPSIGSLNLL
SDTWDFHTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNEIYGFDSSSPGTLPPFAIETE
ETRAMAKHCTVGIEPRVSSERIILLDTQPVFSPSVLAEMIRPDGSSTIPIISGESLSAEL
AHELLSIQLGVLLASICHIILVVSEGVHDASMWQLMSTVDLLKHGIPDPSSLTLSHPQSS
EKENRDKILDNGGEYMADPVFVHSKLCTEDLAPCNLVQLKKALTQFFCSSSFMRSENHNT
AKESQVSAVSSNVHSTGRESEFLKLFVIPSRNKDDSLKPQYESHISALWNLRDQVLSTTG
PSFSRTVSERDWVKNSAKIWEIIRNSSIIVDYCRTLQSSGMFRR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtagtggtggaaaccttagttccaatcaatcatctgtgtctcatcaagctccc
aaaatcctattagcgaaacctggccttgttaccgctggtaaattcaaccgcggtggacct
gacgatgactctacagctcaccgcccacgtcttccctccattggatctcttaatcttctc
tctgacacctgggatttccacacagatcgttttctcccgtttctgacggataatacggac
tttacagtagtgggtgtgattggtcctccaggggttgggaaatcgacgataatgaacgaa
atatatggttttgattctagctctcccggaactcttcctccatttgccatagaaacagaa
gaaacaagggctatggcgaaacattgtacggttggcatcgaaccacgggtttcatctgaa
cggattatactgcttgatacacagcctgtttttagcccctcggttttggctgaaatgatt
agaccagatggctcatccaccatacccataataagcggtgagtctttatcagctgagcta
gctcatgaactattgagcatccagcttggtgttcttctggcatccatttgtcacattata
ttggtggtatcagagggagtccatgatgctagcatgtggcaactcatgtcaacggttgat
ttgctaaagcatggcatacctgatccatcttctttgaccctttctcatcctcaaagctcg
gagaaagaaaacagagacaaaattctagataatggaggagagtacatggctgatccagtt
tttgtgcattcaaagctatgcactgaagatctagcaccatgtaaccttgttcaactgaag
aaggcactcacacaattcttttgctcgtcatcctttatgagatcagaaaaccacaacact
gccaaagagagtcaagtttctgctgtttcttccaacgttcatagtactggtcgagaatct
gaatttttaaaattatttgtaattccatctagaaataaggatgattccttgaagccacag
tatgaaagccacatttctgcattatggaatttgcgggatcaggttttgtcgacgacaggt
ccgtctttctcaaggactgtgtccgagcgtgattgggtgaaaaattctgccaagatatgg
gaaattattaggaattcttccattattgtggactattgcagaactcttcaaagttcaggc
atgtttaggaggtaa
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