Solanum dulcamara (climbing nightshade): 129873263
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Entry
129873263 CDS
T09577
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129873263
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129873263
03041 Spliceosome [BR:
sdul03041
]
129873263
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129873263
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
129873263
Spliceosome [BR:
sdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129873263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Nup35_RRM
PHM7_cyt
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
129873263
NCBI-ProteinID:
XP_055804296
LinkDB
All DBs
Position
11:61773908..61781243
Genome browser
AA seq
866 aa
AA seq
DB search
MELKASYPKQVFSTSDCDSDPEEKEISDDDDRNHKHRRRETHSQSAETGALEPVLSRPFR
KRNRPFANGHLQNLQEGDSHWSDTRFGKRRGMGSFARTPSDSYQRMRLNQSLSGHSGPGR
GRGRESGTWGPCESRFSSIDIASQLMPPLLYTGRGMQNVSSGQSSSWNAFGMVPGMPNGG
LDTLHTLGLQGTLRTALTPAMNMGIPRQMCRDFEERGFCLRGDMCPLEHGVNRIIVEDVQ
SLSQFNLPVSLPIAHMLGPNTAQGSLPAVGPSSSSASGKSLHSKSINPPMIDGGLGMTDT
FGGGSVAGGADFYDPDQPLWSNDHPATSTALLDVNRSKIDDMGPLLNADSSDRNQAGLYD
GCKLEPLDRGAGAASGSQSVCRRISSSKKKFEPFSSTQGVTRHGKQTNVDTIDQKMMEPS
SEPQSSSGRNKRNPSQKALRTLFVRGIPQKDNKPEALLSHFRKFGEVIDIYIPVNGEQAF
VQFSKRDEAEAALKAPDAVMGNRFVKLFWANRDSIMDDGVNGSSNIPCGGTPSTVPPHLS
VPHKRKDNLQIVAPKTAENGVVPVATSDLPKPVARSGPKTTPALQRKLETLELLKEEMRK
KQEMLEQKRNDFRRKLDKLEKQAVGVKDEAVPDQAMKKPKGGGKGSNSGEVESSSATEPS
NAVSSPHAEATPFSCRSTEDAEPICSKSSSIVAAQEASNLKQSIRPLAPIGAPFISNRYK
LDNRPTAFKILPPLPSGLANVDVLKEHFSTFGDLPSVELEDLEPQDCNDGSEVQNTSARI
SFRSRRSAERAYMSGKCWQDQTLHFMWLQSSNSAKDIGVGENVTPASKQPSDVNGQSIVN
NCLAGSQEGSGAGNGKPENQERKEDE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaagcttcatatccaaagcaggtattttcaacttctgattgcgacagtgat
cccgaggagaaagaaattagtgatgacgatgatcgtaatcataagcatcgtagaagggaa
acacattcacagtctgcagagacaggggctcttgaaccagttttaagtagaccattcagg
aaaaggaacaggccgtttgcaaatgggcaccttcagaatctccaggaaggagattctcac
tggagtgatactaggtttggcaaaagacgaggaatgggttcttttgccaggacaccttca
gattcatatcagaggatgaggctaaatcagtccctttctggtcattctggtcctggtagg
ggtcgaggaagagaatctggtacttggggtccctgtgaatctaggttcagctctattgat
attgcatctcaattgatgccacctcttctttatactggaagggggatgcagaatgtttct
agtggacagagttcatcttggaatgcatttggaatggttccaggaatgcccaatggtggg
cttgatacacttcatacccttggtttacagggaacacttaggacagccttgactcctgcc
atgaatatgggaattccaaggcaaatgtgtagagacttcgaggagcgtggattttgccta
agaggagatatgtgcccactggagcatggagttaatcgtatcattgttgaagatgttcag
agcctttctcagtttaatcttcctgtttcacttcccattgctcatatgctgggaccaaat
actgcacaaggatctttacccgcagtaggcccctctagctcatcagctagtggaaaatct
ttacatagcaaaagtatcaaccctccaatgattgatggtggattaggtatgactgatact
tttggtggtggttctgtggctgggggagctgatttttatgatcctgatcagcctttatgg
tcaaatgatcatcctgcaacttcaacagcactcttggatgtcaatcggtctaaaattgat
gacatggggcctttgctgaatgcggactcctctgatcggaatcaggctgggctttatgat
ggctgtaaactcgaacctctagatagaggtgccggagcagcttcaggatctcaaagtgtg
tgcagaagaatcagtagttcaaaaaagaagtttgaaccattcagcagcactcagggtgtc
acccgtcatggtaagcaaacaaatgtagataccatagaccagaaaatgatggaaccatct
tcagagccccaaagtagttctggacgcaataagcgaaacccatctcaaaaggcacttcgt
actctatttgttagagggattcctcaaaaagacaacaaaccagaagctcttctgtcacat
tttcgaaaattcggggaggttattgacatctacatcccggtaaatggcgaacaagctttt
gttcaattttctaagagggatgaagctgaggctgctttaaaagcaccagatgccgtgatg
ggaaatcgctttgtaaagcttttctgggcaaacagggatagcattatggatgatggagta
aatggtagtagtaatataccttgtggtgggacccctagtacagttccacctcatctatct
gttcctcataaaagaaaagacaatctgcagattgtagcgccaaaaactgctgaaaatggt
gttgttccagtagccacctctgatctgcccaagcctgtggctaggagtggtcccaaaact
acaccagctttgcaaagaaagctggaaactttagagcttctgaaggaagaaatgcgcaag
aagcaggaaatgcttgagcagaagcggaatgacttccgacgcaagttggataaacttgag
aagcaagccgtgggtgtgaaagatgaggcagtgccagatcaggctatgaaaaaaccaaag
ggaggaggaaaaggttccaactctggtgaagtggaaagttcaagtgccacagaacctagt
aatgctgtgtcatcaccacatgctgaagcaacaccatttagttgcagatctacagaggat
gccgagcctatttgttccaaatcatcttcgattgtcgcagcgcaagaagcttcaaacttg
aagcagtcaatccgtccattggcaccaattggcgcaccgtttatctcaaatagatacaaa
ctagataaccgacccaccgcattcaagatccttccacctctgccaagtggtctagcaaat
gttgacgtcctgaaggaacacttctctacatttggtgatcttccttctgttgagctggaa
gatttggaacctcaagattgtaatgatggctcagaggtgcaaaatacatctgctaggata
tctttccgatcacgtcgatctgctgaaagagcatatatgagtggtaaatgctggcaagac
caaactctgcattttatgtggttacaatccagtaattctgcaaaggatattggtgttgga
gaaaatgtcactccagcttcaaagcagccttcagatgttaatgggcaatccattgtaaac
aattgtctggctggttcccaggaaggaagtggggctgggaatggtaaacctgaaaatcaa
gaaagaaaagaagatgaatga
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