Solanum dulcamara (climbing nightshade): 129873296
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Entry
129873296 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129873296
KO
K15559
regulator of Ty1 transposition protein 103
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129873296
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129873296
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Allexi_40kDa
CREPT
PglZ_C
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
129873296
NCBI-ProteinID:
XP_055804337
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Position
11:complement(62869885..62880099)
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AA seq
524 aa
AA seq
DB search
MNIVSKTMGSTFNTQILVDKLAKLNSSQQSIETLSHWCIFHMNKAKQVVETWAQQFHCSP
REQRLSFLYLANDILQNSRRKGAEFVGEFWKVLPDALRDVVENGNEFGRNAALRLISIWD
ERKVFGSRGQILKEEFAGKHVGNGKHSGGKVRNSAGDALDKIVSSYQILYGGQIDEDAIL
SRCKIAVSCVEKIDKEIGSDLNPGHLNGSGIVDELKGQHTILKDCVEQLTTVESSRENLI
SHLREVLHEQEYKLDQVRNQLQAAQSHADQVGSICRQLLNFDGNGQILAEQNRKEASTSQ
APHTFISGNREQSAPVMYTRQVSYEKPGNLDEDMKSAAAAVAAKLTASTSSAQMLTYVLS
SLASEGVIGNSTKESSHDNQPEKRMKLENERSSYAPPQNPQEALSFFSQPNSVQHNLPST
ARESTPIEPPPLPSSPPPLPPLPPMQPYPVPQFIQTSGQLPSSAFVYATTQQPSTLPGFP
QVVPPVNGISPFTSPATIAYQGYSTESNLYSQSSSLPMAPVTRQ
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgtgtccaaaacgatggggagcacatttaatacgcagattttggtggataag
ctagcaaagctcaatagttcacagcaaagcattgaaactttgtcgcattggtgtattttt
cacatgaacaaagcaaaacaagttgtggaaacttgggcccagcagttccattgctcacca
cgtgaacaaagattgtcatttctttaccttgcaaatgacatccttcaaaatagtaggaga
aagggcgcagaatttgttggtgaattttggaaggttcttccagatgctcttcgtgatgtt
gttgaaaatggaaatgagtttggaagaaacgctgcattgcggctgatcagtatctgggat
gagagaaaagtctttggttctcgagggcagattctgaaggaagagtttgctggaaagcat
gttgggaatggaaagcatagtggtggaaaagtgagaaactcagctggagatgcccttgac
aaaatagtttcaagctatcagatattgtatggcggtcaaattgacgaagatgcgatattg
agcagatgtaaaattgctgttagctgtgttgaaaaaatagataaggagattgggagtgat
ttaaatccaggccatcttaatggatccggtatagtggatgagctcaaggggcagcacaca
atattgaaggactgtgttgagcagctaacaactgttgaatcatctagggaaaacctcatc
tctcatctcagagaggtcctccatgagcaggaatataagctggatcaagtgcgcaatcaa
cttcaggctgctcagtcccatgcagatcaggtaggcagtatttgcagacagttgctgaat
tttgatggcaatgggcaaatcttggctgagcagaatcgaaaggaagctagcacctcccaa
gctccacacacattcatatctggaaatcgtgaacaatctgctcccgtgatgtacactcga
caggtatcttatgaaaaacctggcaaccttgacgaagatatgaaatctgcagctgctgca
gtcgcagcaaagctcactgcatcaacatcttcagcccagatgctgacttatgtcctctca
tccttggcgtccgagggtgtcataggcaactcaactaaagaatcttcccatgataatcaa
ccggagaaaaggatgaagcttgaaaatgagcgctcttcttatgccccccctcagaatcct
caagaagccctctcatttttctctcagccaaactcagtgcaacacaatcttcccagcact
gctcgggaatcaactccaattgaaccgcctcctctaccatcatcacctccaccattgcca
cccctgcctcctatgcagccatatccagtacctcagttcattcagacatctggtcagttg
cctagttcagcatttgtttacgcaacaacccaacaaccttcaacattgcctggttttccc
caagttgtccctccagtcaatgggatttctcctttcacatctcccgctacaattgcttat
caaggttattcaactgagagtaatttatatagccagtcttcatccctgccgatggcaccg
gttacccgtcagtag
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