KEGG T09577: 129873605

Solanum dulcamara (climbing nightshade): 129873605

Entry

129873605         CDS       T09577

Name

(RefSeq) zinc finger CCCH domain-containing protein 14

K18753

butyrate response factor

Organism

sdul Solanum dulcamara (climbing nightshade)

Brite

KEGG Orthology (KO) [BR:sdul00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129873605
Messenger RNA biogenesis [BR:sdul03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129873605

SSDB

Motif

Pfam:

zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_2 Torus Lustrin_cystein zf-CCCH_11 PPL4 KLRAQ NYD-SP28_assoc

Other DBs

NCBI-GeneID:

129873605

NCBI-ProteinID:

XP_055804705

LinkDB

Position

11:55318452..55321025

AA seq 342 aa
MQNENPSSDGLNTSTADAATVPSGNKNYTFCDATSPHLADNPFLSPTSTQQFDSSEFIPN
FYSTFSRSSNSPSLTSFDDDTDDIVNDRRLHQASYILEYQQLYNRYTLCLAHLQESIKEV
EALHQENESLRLVNTDLDRRLSVLTQATIQNCLLSDFNRFGMGVNRDNQISDSRPSNTRQ
GSVVETNRPERRNVERVSLPKSISVRSSGYLKLKAQGGNNGGPSQAKARQKSTVPPLIES
QQRVYVPGGKKEEEAVEFDVYNQGMLKTELCNKWQETGTCPYGENCQFAHGITELRPVIR
HPRYKTEVCRMVLAGDMCPYGHRCHFRHSLTEEERRTGPGLF

NT seq 1029 nt +upstreamnt +downstreamnt
atgcagaacgagaatccttcaagtgatggcctcaacaccagcaccgccgatgcagctaca
gtcccgtccggcaacaaaaattatactttctgtgatgcaacttcaccacacttggctgac
aatccatttctctcacctacctcaactcaacaattcgattcctctgaattcatccccaac
ttctactcaactttctctcgcagctcaaactccccttccctaacctcctttgacgacgat
actgatgacatcgtcaatgatcgccgcctccaccaagctagctacattctcgagtaccag
caactctacaatcggtacactctctgcctcgctcatctgcaggaatctatcaaagaagtc
gaagctcttcaccaggagaacgaatctctccgacttgttaacaccgatttggatcgacgc
ctgagcgtcctcacgcaggccaccatacaaaactgtcttctctctgatttcaatcgtttt
ggtatgggagtcaaccgagataatcaaatatctgattccagaccctcgaacaccaggcag
gggagcgtcgtggaaacgaaccggcctgagcgaaggaacgtcgaacgagtctcgctgcca
aagagcatttctgtccgctcgagcggttatctcaagttgaaagcacaaggtggaaacaat
ggaggtcccagccaggcaaaagctcggcaaaaatctacggttccacccctaatcgaatct
caacaaagagtgtacgttcctggaggcaagaaggaagaggaggcagtagagtttgacgtt
tacaaccaagggatgttgaagacagagctgtgcaacaaatggcaggagactgggacttgc
ccttacggagaaaactgtcagttcgctcacggtatcacagagttgcgcccagtgattagg
catccacgctacaagacagaggtctgtcggatggtcctagcaggtgatatgtgcccctat
ggtcaccgttgccacttccgtcactctctcactgaggaagaacgacgaacaggtcctggc
cttttctga

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