Solanum dulcamara (climbing nightshade): 129873647
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Entry
129873647 CDS
T09577
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129873647
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
129873647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
129873647
NCBI-ProteinID:
XP_055804751
LinkDB
All DBs
Position
11:24671171..24731176
Genome browser
AA seq
1619 aa
AA seq
DB search
MLRVPVSTPSSVSNQGEMEHNNTQQAQSQLRSRSHHQFHPSRPAILDLFNLYLGLKNSGQ
KSDDSIREPPNKTQKRVTALNRELPPRNEQFLLDFGQLQSQFTDKEQLSAVAESVLISLV
VHCSSHAPRAEFILFAICSLSSIGFINWDSFLPSLLSSISSTEISASQANLPSGAVSSAN
LTSGLLPSSSTVVSTSIFHSSNPASPLPTVHGIGSPLQSAAEPSSSAALSPVKSSDVNGT
SQQSIAKVNLLSRDNATSSLRQLCCKIILTGLDSNLKPVTHAEVFHHMLNWLINWDQKLH
GVDELDSTKYWKPDKALIKWLHSCLDVIWLLVENDKCRIPFYELLRSGLQFLENIPDDEA
LFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTPRLLPQATANSSGEAVANMRYSPITYS
SVLGEPLHGEDLAASIQKGSLDWERALRCLKHALRNTPSPDWWRRVLLVAPCHRVHAQAP
TPGAVFTSEMVCEAVIERVVELLKLTNSEINCWQEWLIFSDIFFFLMKSGCVDFVEFVDK
LVLRLQEGDQQILRTNHVTWLLAQIIRVELVMNALNTDSRKVETTRKILSFHKEEKSSDP
HNAQSILLDFISSCQNLRIWTLTTATREYLNNEQLQKGKQIDEWWRQVNKGERMMDYMNL
DDRSIGMFWVVSYTMAQPACETVMNWLTSAGVTEHLPGPNLQSNERLMVMREVSPLPMSL
LSGLSINLCLKVAFQMEESMFSGQAVPSIAVVETYCRLMLISPHSLFRSLLTHLTSRNPT
TLSKPGNTILVFEILNYRFLSLYRYQGKSKTLMYDVTKMISTLKGKRGDHRIFRLAENLC
MNLILSLRDFFFVKREGKGPTEFTETLNRITIVTLAIIIKTRGIGEFEQLLYLQTMLEQI
LATSQHTWSEKTLRYFPSILRDALSGRMDKRGLAIQAWQQAETTVINQCTQLLSPSADPS
YVVTYINHSFPQHRQYLCAGAWILMHGHPENINCTNLGRVLREFSPEEVTANIYTMVDVL
LHHIHLELQRGHPLQDLMLKACGNLSVFIWNHELLPPDILLLALIDRDDDPHALRIVINL
LDSKELQQRVKLYLINRGPPEHWLSSGPFKRVELQKALGNYLSWKERYPTFFDDIAARLL
PIIPLIIYRLIENDAMDAADRVLQVYSTFLHCYPLNFTFVRDILAYFYGHLHGKLILRIL
NILDIKKIPFSESFPQYVNSSNAVMCPPLDYFATLLLSLVNHVIPALNNSSKCAAMGDFA
NNSTRAPHGKNQAPSQPGPTNYVDGQKPYYQMQDPGTSTQLTLETAVIELLSLPVSPSQI
VSSLVQIVVHIQPTLVQSSNGLHGAPGSSGQGSVLPTSPSGGSTDSLGATRTTPSVSGMN
TSNFVSRSGYTCQQLSCLLIQACGLLLAQLPPEFHVQLYVEAARIIKESWWLTDAKRSVG
ELESAVSYALLDPTWAAQDNTSTAVGNIVALLHAFFCNIPQEWLEGTHVIIKHLRPVTSV
AVLRISFRIMGPLLPRLVNAHTLFSKTVSLLLNILVDVFGRNSQPSAPIEATEITDLIDF
LHHVIHYEGQGGASSKPRPEILALFGRAAENLRPDVQHLLSHLNTDANTSIYAKSVHNA
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgagttcccgtttccactccaagcagtgtatcaaaccaaggagaaatggagcac
aacaacacacaacaggctcaatctcagttgaggtctcgatcccaccaccagtttcatccc
tctcgacctgccatccttgatctcttcaatttatacttgggactgaaaaattctggacaa
aaatcagatgattctatcagagaacctccgaacaagacacagaagcgagtaactgctctt
aacagagagcttcctccacgaaatgagcaattcctcttagattttggacagctgcagagc
cagtttactgacaaggaacagctaagtgcagtggcagaatctgttcttatttctctggtt
gttcattgcagtagtcacgcacctcgtgcagaatttattctattcgccatatgcagtttg
tctagtataggattcataaactgggattctttcttgccttctcttctttcctccatttca
tccactgagatatccgctagtcaggctaatctaccatctggtgctgtctcttctgctaat
ttaacatctggattgctcccatcttccagcacagtagtgagtacctccatttttcactca
tcaaatcctgcatctcctttgcccactgtccatggtattgggtcccctcttcaatcagca
gctgaaccctcatcttctgctgctttgtctcccgtgaagtcttctgatgttaatggtact
agccaacagtctattgcaaaagtgaatttgttgtcaagggataatgctacaagcagtctg
cgtcagttatgttgcaaaattattttaactggtctagattctaatcttaagccagtaaca
catgccgaagttttccaccatatgttgaattggttgattaattgggaccaaaagttacat
ggtgttgatgaattagacagtacgaaatattggaaaccagataaggccctgattaagtgg
ctacacagttgtttagatgttatttggttgctggttgagaatgataaatgccgcataccg
ttttatgaacttctccggagtgggttgcagtttttagaaaatataccagatgatgaagct
ctgttcactcttattttggagatccatcggaggcgagatatgatggctatgcatatgcaa
atgttggatcaacaccttcactgccctacatttgggacccctcgacttctgcctcaagcc
actgcgaattcgtccggtgaagcagttgctaacatgagatattcaccaatcacatattct
agtgtgcttggggaaccattgcatggtgaggatcttgcagcatccattcaaaaaggaagt
ctggattgggagagagctttgcgttgtctaaagcatgcacttcggaacactccatcacca
gactggtggagacgtgtgctcctcgtggctccctgtcacagagttcatgcccaggctcca
actccgggtgctgtatttacatcggaaatggtttgcgaggcagttattgaaagagttgtt
gaattattgaagttgactaattcagaaatcaattgctggcaggagtggcttatattctca
gatatattcttttttctcatgaaaagtggatgcgttgattttgtggagttcgtggacaaa
ttagtattgagacttcaagagggtgatcaacaaatacttaggacgaaccatgttacgtgg
ttacttgcacaaattattcgggttgaactagtgatgaatgctctaaatacagactcaaga
aaggtggagaccaccagaaaaattctttcattccataaagaggagaaaagctctgatccc
cataatgctcaaagtatcctacttgatttcattagcagttgtcagaacttgcgcatttgg
acactaactacagcaacaagagaatatctgaataatgagcagctacaaaagggaaaacaa
attgatgaatggtggagacaagttaacaaaggggaacgcatgatggattatatgaatttg
gatgatagatcaattgggatgttttgggttgtgtcctacacaatggcccagcctgcttgt
gaaactgtgatgaactggttaacctccgcgggggttactgagcatttacctggaccaaat
ttgcagtcgaatgagagattaatggtgatgcgtgaagttagccccctgccgatgtcattg
ttatcgggattgtccataaatttatgcttgaaagtggcctttcagatggaagaatcaatg
ttttcgggacaggctgttcccagcattgctgtggttgaaacctactgtaggttgatgctt
atttctccccattcgttgttccgttcgctcttaactcatctgacatcgaggaatcccacc
acattgagcaagccaggaaacacaatcttggtgtttgaaattcttaactatcgcttcctt
tcactctacaggtaccaaggcaagagcaagacattgatgtatgatgtcaccaaaatgatt
tctacactgaaggggaaacgtggagatcatcgcattttcagattggctgagaacttatgt
atgaatctgattttgtcattgagagactttttctttgtgaagagggaagggaagggtcca
actgagtttactgagactttaaataggataacaattgttactcttgcaatcataattaaa
acccgtggaattggagagtttgaacagttactgtatcttcaaacaatgctggaacaaatc
ttagcaactagccagcatacctggtctgagaaaactttgcgctattttccttcaatttta
cgcgatgccttgagtgggcgaatggataaaaggggcttggcaatccaagcatggcagcag
gcagaaacaactgttatcaatcaatgcacacagcttctttcgccctcagctgatccctca
tacgttgtgacttatattaaccacagttttcctcagcaccgccagtatctttgtgctggt
gcgtggatactaatgcatgggcatccagagaatattaactgcacaaaccttggacgtgtc
ttgagagagttttctcctgaagaggtgactgcaaatatttatacaatggtagatgtcctg
cttcatcatattcacttggaactacagcgtggacatcccttgcaggatcttatgctaaaa
gcctgtggaaacctttcagttttcatctggaaccatgagcttctgcctccagatatccta
ctgctggcacttattgaccgtgatgatgatccacatgctttgcgcattgtaattaactta
cttgacagtaaggagctccaacaaagagtgaaactttatctcataaatcgtggcccgcct
gagcattggctttcgtctggaccttttaagcgtgtagaattgcagaaagctcttggaaat
tatctgtcatggaaggagaggtatccaacattttttgatgatattgctgcacgcctgctt
ccaatcatcccccttatcatatatagactcattgaaaatgatgctatggatgcggctgat
agagttcttcaagtttattcaaccttccttcattgctatcctctgaactttacgtttgtt
cgtgatatacttgcttatttctatggtcatcttcatggaaagctaatactccgtatactg
aatatcttagatattaaaaagataccattttcagagtcattcccacaatatgtcaactca
tcaaatgcagtcatgtgcccaccattggactactttgctactcttttgttaagcctggtg
aatcatgttattcctgctttaaataatagctccaaatgtgcagcaatgggagattttgca
aataattctacccgtgctccccatgggaaaaaccaagcaccatcacaacctgggccaact
aattatgttgatgggcagaaaccatattatcagatgcaagaccctgggacatccacccag
cttactcttgaaacagctgtcatagaattactttctcttcctgtttcgccgtcgcagatt
gtctcatctcttgttcaaattgttgttcacatacaaccaacccttgtccaatccagcaat
gggctgcatggagctcctggtagttctgggcaaggctctgttttgcctacttctccttca
ggggggagtactgattctttgggtgcaactagaacgactccatcagtttcaggaatgaat
acttctaattttgtttcacgtagtggttatacttgccagcagctgtcttgcttgttgatc
caagcatgtggtcttcttttggcacaacttcctccagaatttcatgtgcagctatatgtt
gaagctgcacgcataataaaagaaagttggtggcttactgatgctaaaaggtcagtgggt
gaattagaatctgctgttagctatgctctactagacccgacctgggctgcacaggataat
acctcaacagctgttggtaatattgtcgcactgctacatgctttcttctgtaacatccca
caagaatggctcgagggaacacatgttatcattaagcatcttaggcctgtgacatcggtt
gcggtattaagaatatcatttcgtattatgggtcccttgcttccgaggttggtcaatgct
cacactcttttcagtaagacagtgtcgctgcttttgaatattttggtggatgtgtttggg
aggaactcacagccgtcagcacctattgaagcaaccgaaatcactgatcttatcgacttc
ctgcatcatgttattcattacgaggggcagggaggggcatctagtaaaccccgaccagaa
attttggctctttttggaagagcagctgaaaatttgcgtccagatgttcaacatcttctt
tcccacctcaacactgatgcaaacacttctatttatgcaaaaagcgtccacaatgcttaa
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integrated database retrieval system
