Solanum dulcamara (climbing nightshade): 129873757
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Entry
129873757 CDS
T09577
Name
(RefSeq) cyclic nucleotide-gated ion channel 18-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129873757
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129873757
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129873757
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
HTH_17
Motif
Other DBs
NCBI-GeneID:
129873757
NCBI-ProteinID:
XP_055804902
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Position
11:61223256..61231412
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AA seq
689 aa
AA seq
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MTRIFAKPASHLRHFHQSLKNKSSFTDVPWWRQILDPNSDIVNRWNYVFLLTCLISLFID
PLYFYVPFVSERACMSTDDEAARAITVYRSLTDIFYFLHIGMKFRTAFVAPSSRVFGRGE
LVMDPREIAIRYLKTDFIVDFTAALPLPQIVIRYVIPAAKRNGSGHSKSTVALIVLIQYV
PRLFVIFPLNQQIIKTTGFIAKTAWAGAAYNLLLFMLASHVAGASWYVASIGRQYSCWSI
ECRKEHDAVPPCILEFLDCTSVEDSYVRDYWRNSTQVLAKCDAINDEDSGFKFGIFADAF
TNEVASSTFMEKYLYCLWWGLRNLSSYGQNLNTSTYIGETLFSIFISIIGLVLFAQLIGN
MQTYLQSMTVKIEEWRIRKRDVEEWMRHRQLPEDLQERVRRFDQCKWLATRGVKEDVILQ
SLPLDLRRQIQRHLCLNLVRRVPFFEQMDDQLLDAICERLVSSLSIMGTYVVLEGDPVNE
MLFIIRGQLESSTTNGGRSGFFNSITLGPNDFCGEELLTWALLPNSTQLPASTRTVRTLS
EVEAFALRAEDLKFFAVQFKRLHSMKLQHAFRYYSHQWRTWGSCFIQAAWRRYRKKKMEY
ELALQESYYYMPDPNDDGNYNEQSFDDAGPEQPLVDSDSRGSQQLGATILAKRFAANTRR
GIEQKMADSSSSLKMPKLFKPDEPDFSAE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgactagaatatttgcaaagccggcgtctcacctccgtcatttccatcaatcgttgaag
aacaaatcctctttcactgatgtgccatggtggcgccagattctcgatcccaacagtgat
attgtaaatcgctggaactatgtcttcctccttacctgtctcatctctcttttcatcgat
cctctttacttctacgtccctttcgtcagcgaaagggcttgtatgtccacggatgacgaa
gctgcccgtgccattaccgtctatcgttctctcaccgacatcttttacttcctccacatt
ggcatgaagttccgcaccgcttttgtcgctcctagctccagggttttcggccggggtgag
cttgtcatggacccccgtgaaattgctattagatatctcaagaccgatttcatcgttgat
tttacagctgctcttcccctgcctcagattgtcattcggtatgtaatccccgcagctaaa
agaaatggatctggtcattccaaaagtactgttgcccttatcgttctcatccaatatgtg
ccaaggttattcgttattttcccattaaatcagcagattatcaaaactacaggttttatt
gctaaaacagcctgggcaggagcagcttataatctccttctgttcatgttagcgagccat
gtggcgggagcttcctggtacgtggcttctataggaagacagtactcttgctggtcaatt
gaatgtaggaaggagcatgatgcagttccaccctgcattcttgaatttttagactgtaca
agtgttgaggatagttacgtacgcgattactggcgaaacagcacgcaagtgcttgcaaaa
tgtgatgctataaatgatgaagattctggttttaagtttggaatttttgctgacgccttt
actaatgaagtggcttcatcaacattcatggagaaatatttatactgtctttggtggggg
ctaagaaatttgagttcatatgggcagaatttgaatactagcacatatattggcgaaacc
ttattcagcattttcataagcatcatcggtttagttctctttgcacagctaattggaaac
atgcagacttatctgcaatctatgaccgtaaaaattgaggaatggagaattagaaaaaga
gatgtagaagaatggatgaggcaccgccagttgcctgaagacttgcaagaacgtgttcgc
cgttttgatcaatgtaaatggcttgcaacaagaggagttaaagaagatgtgatcttgcaa
tctttgcctttggatcttcgtcgccaaatccaaagacacctatgccttaatcttgttcga
cgagttccattttttgagcaaatggatgaccagctgcttgatgcaatatgtgaacgccta
gtgtcgtccctgagcataatgggcacctatgttgttctagaaggtgatccagtgaatgag
atgctctttatcatcaggggacaactagaaagctccacaacaaatggaggaagatctgga
ttcttcaattctatcacccttggacctaatgatttctgtggtgaagaattattgacttgg
gccttactgcctaattcaacgcagttgcctgcttcaactcgaactgtgagaacactttct
gaagttgaagcatttgcacttcgagctgaagacctgaaattttttgcagttcaatttaaa
aggcttcacagcatgaagctacagcatgcatttaggtactattctcatcagtggagaaca
tggggttcttgctttatacaggctgcatggagaaggtataggaagaaaaagatggaatac
gagttggctctacaagagagctattattatatgccagatcctaacgatgatggtaactac
aatgagcaaagttttgacgatgctggtcctgagcaaccattagtagacagtgattctcgt
ggttcccaacaacttggagctacaattttggccaaaagatttgctgctaatacgagaaga
ggaatagaacagaagatggctgattcttcttccagcttaaaaatgcccaagttgtttaag
ccagatgagcctgatttttctgcagaatga
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