Solanum dulcamara (climbing nightshade): 129873845
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Entry
129873845 CDS
T09577
Name
(RefSeq) protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129873845
03036 Chromosome and associated proteins [BR:
sdul03036
]
129873845
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129873845
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129873845
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
129873845
microRNA pathway
RISC loading complex
129873845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
129873845
NCBI-ProteinID:
XP_055805011
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All DBs
Position
11:43096190..43101702
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AA seq
1099 aa
AA seq
DB search
MDRGKYQRGGGYRGRGRGRGYYEQGQGQGRGEPQMGSSSCNQPPFQSPQQWGNQPRPLDP
DNQNYPVSQSPGRGGTLVSQPGRGTASPRPQQQQGTDDPSTAWPTLAKAAQQQGSDVAST
AWPALPQKKSSSVPSTVWSRPPLQHGSGGGVGTSLQQHGGGNEQQQVSSGGVGTVSARPS
LPQQPQKQGSGGGVSNVWLRPPSLLHGGGNKQKQVSSGGVGTVSARPPPLQQPRKQDVPV
LLGTLNTTDPESSENKRVPKPRPDAGNKSGQSIRLFANHFHVTFNPETIIMHYDVDVQEK
VDGNRTGKTVTDKSDLRRIREKLCKDMPEEFPIDKTAYDGMKSIFSAVPLPNKCFTVNCS
DDGRSYDFTIKFATELNLGNLNEYLGGNFLGNPSNILQGMELVMKENPKRCRISVGRCFY
SNVPYEDFGLGVAAHTGFQQSLKPTSEGLALCLDYSVLALPNPIPVVKFLELFFGVPLKE
IFRSKRQAATDVLTGLKVRVNHRRNKQKFVIKTLTRDKTSELTFHFEDTEGHKRKVHLVD
YFREKYQVEIELEDIPSLDIGKGKKKNYVPMEFCELVREQRFPTDRLDMNTSRVLRKKSL
PDPPERRETIRNMVLAQDGPCGAITRNFEIEVDDDMISITGRILPVPVLKIGGQRPLYIN
NKEKCQWNLVGKYVAEGKALQRWALIDFTPSRSNLSLQVDQFVNGLIDRCRNLGMKSEGP
VVIRSSGMNVLSDVDKVEELLKDVVDEARQKNKGKLQMIVCVMESKHNGYKYLKWVSETK
IGIVTQCCLSSNANKRQDQFFSNLCMKINAKLGGSNMELMESLPNFTSVDNVMFIGADVN
HPGARNDDKCPSIAAVVATINWPAANRYAARVRPQDHRTEKILNFGQMCKDLVDTYARLN
SVKPNRIVVFRDGVSESQFDMVLNQELSDLANTIYESHYRPAITLVVAQKRHHTRLFPAV
GSGNVLPGTVVDTKIVHPSDFDFYLCSHYGQLGTSKPTHYHVLWDENGFTSDSLQTLIYH
MCFTFARCTKPVSLVPPVYYADLVAYRGRMFQEVLMEMNSPRSTTSSNAASSSSSSSRAS
FEQKFYDLHSDLRNIMFFV
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtggaaagtaccaacgtggtggaggttaccgtggtcgaggtcgtggtcgtggt
tactacgaacagggacaaggccaaggccgtggtgagcctcagatgggttcatcttcctgt
aaccaaccaccatttcagtctccacagcaatgggggaaccagccaaggccattggatccg
gacaatcagaactatccagttagtcagagtccgggtcgtggtggtactctggtcagccaa
cctggtcgtggtactgcttcgccacggccacaacagcaacagggtactgacgacccaagc
actgcttggccaacgctagcaaaggctgcacagcaacagggtagtgacgttgcaagcact
gcttggccagcgctaccacagaaaaagagcagtagcgttccgagtactgtttggtcccgt
ccacctttgcaacacggcagtggcggcggcgttggtacttctctgcagcaacatggtggt
ggaaacgagcaacagcaggttagtagcggtggagttggtactgtttcggctcggccatca
ctaccgcagcagccacagaaacagggtagtggcggcggagttagtaatgtttggctccgg
ccaccgtcgctgctacatggtggtggaaacaagcagaagcaggttagtagtggcggagtt
ggtactgtttcggcacggccaccaccactgcagcagccacggaaacaggatgttccagtt
cttctggggaccctgaatactacggatccagaaagttccgagaataaacgtgtgccaaag
ccacgacctgatgctggaaacaagtctggccagtcaattaggctgttcgctaatcacttt
catgttacatttaatcccgagactatcataatgcattatgatgtggatgttcaagagaag
gttgatgggaatcgaactggaaagacggtaacagacaagtctgatctccgtaggataaga
gaaaagttgtgtaaggatatgcctgaggaatttcccatagataaaactgcatatgacggt
atgaagagcattttcagtgctgttccacttcctaataagtgtttcaccgtgaactgctct
gatgacgggcgctcgtatgactttaccatcaagtttgctactgaattaaatcttggcaac
ctgaacgagtatttgggtgggaacttcttgggtaatcctagtaatatactacaaggaatg
gagttggttatgaaagaaaatcctaaaaggtgcaggatttctgtaggtcgttgtttctac
tctaatgtgccttacgaagactttggtctcggggttgctgcacatacaggttttcagcag
agcctaaagcctacatctgaagggcttgcgttgtgcttagattactcagtcttggcactc
ccgaacccaattccagtggtgaagtttctggagttgttttttggagtacctctcaaagaa
attttcaggagtaaaaggcaagctgcaactgatgtattgactggtttgaaagtcagagta
aatcatcgtcgtaacaagcagaagtttgttattaagactctaactcgagacaagactagt
gaacttacttttcattttgaagatacagaaggccacaaaaggaaggttcatcttgttgac
tacttcagggaaaaatatcaggtggagattgagctcgaggatattccttcattagatatt
ggaaaaggtaaaaagaaaaactatgtcccgatggaattctgtgaattggttagggaacaa
cggtttcctacggatcgtttggatatgaatacatcccgggttttgaggaagaaatcacta
cctgatcccccagagagaagggagacaatacgtaacatggtactggctcaagatggaccg
tgcggggctatcacccgtaattttgagattgaagttgatgatgacatgatcagtattacg
ggtcgtattcttcctgtccctgttttgaagataggcggtcaacgtccactttatatcaat
aataaagaaaaatgccagtggaaccttgttgggaaatatgtggcggaaggcaaagcgctt
caacgatgggctttgatagattttaccccctctagatccaacttaagtctacaagttgat
caatttgttaacggattgatagatcggtgcagaaatttgggtatgaagagtgaaggacct
gtcgtaatacgttccagtggtatgaatgtactctctgacgttgataaggttgaagaactc
ctcaaagatgtggttgatgaagctcgccagaaaaacaagggtaaacttcaaatgatagtt
tgtgttatggaatcaaagcacaatgggtacaaatatcttaaatgggtctctgagacaaaa
attggcattgtaacccagtgttgcttgtcttctaatgccaacaagagacaggatcaattt
tttagtaacctctgtatgaagattaacgcaaaacttggaggcagcaatatggaacttatg
gaaagtctccctaatttcacaagtgtggacaatgtcatgttcattggagctgatgttaat
catcctggtgccaggaatgatgacaaatgtccatccatagcagctgttgttgccaccatc
aactggccagctgctaatagatatgccgctagagttcgtcctcaggaccacaggactgag
aagattctaaactttggacaaatgtgtaaagacctagttgatacttatgctcgactcaac
tcggttaaaccaaacagaattgttgttttccgtgatggtgtgagtgagagtcagtttgat
atggtactcaaccaagagttgtctgatttggcgaacactatatatgagagtcactatcga
ccagcaatcactcttgttgtggctcagaagagacaccatacacgactatttcctgcagtc
ggcagtggaaatgtgcttccgggtactgttgtggatacaaaaattgttcatccatctgat
tttgacttctatctttgcagccactatggacagttgggtactagcaagccaactcactat
catgttctatgggatgagaatggtttcacttctgacagcttacaaacgcttatataccac
atgtgcttcacttttgcgcgatgcactaaacctgtttcacttgttccaccagtttactat
gcagaccttgttgcctacaggggaaggatgttccaagaggtgcttatggagatgaactct
cctaggtctacaacttcatccaatgcagcttcgtcgtcgtcatcttcttcacgtgcctca
tttgaacaaaaattttatgatctgcactctgatttgcggaacataatgttttttgtttaa
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