KEGG   Solanum dulcamara (climbing nightshade): 129873971
Entry
129873971         CDS       T09577                                 
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129873971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdul03041]
    129873971
   03009 Ribosome biogenesis [BR:sdul03009]
    129873971
Enzymes [BR:sdul01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     129873971
Spliceosome [BR:sdul03041]
 Complex A
  U1 snRNP components
   U1 related factors
    129873971
 Complex B
    129873971
Ribosome biogenesis [BR:sdul03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    129873971
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 129873971
NCBI-ProteinID: XP_055805148
LinkDB
Position
11:61626046..61634956
AA seq 731 aa
MAATATASSAGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNTTQYERPVAISHGGTA
QHKSSVSVSSSVERPSQSQHPDRDDNRGTNGGLSKLSSGEGIQTARGNEHSRDGTSAPKG
YSVPAAGSDISPDAYRRQHEISVTGGDVPPPFTSFEATGFPSEILREIHQAGFPAPSPIQ
AQSWPIALQGRDIVAVAKTGSGKTLGFLLPGFILLKQRRSNPQSGPTILVLSPTRELATQ
IQDEAVKFGRSSKISCTCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILEMRRVRLDQV
SYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKEVRRIAADLLVNPVQVNI
GNVDELVANKSITQYIEVLSYMDKQKRLDQILRSQEPGSKIIIFCSTKKMCDRLAQNLTR
PFGAAAIHGDKSQGERDHVLSQFRTGRSPVLVATDVAARGLDVKDIRVVVNYDFPTGIED
YVHRIGRTGRAGATGEAYTFFCDQDAKHASDLIKVLEGANQQVPTELRDMASRGGGMGKA
RRQWDSGSGGREGGHGGRYDAGYGGRGGGRGGWEVPSSERSGRVYDSDSRDSDRNGDGSR
DTEAPVSFHARSFHETMMQASQRGDRSRSRSPNRGSGWGDRKSRERSRSPSAERYRAPLQ
VPVGRSFHESMMACGRSAGDFREKVGGSYDDCQKDWEKERSPRRWQGDGKSGNRPRANNG
EEEEGMFPEGR
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggctgctactgcaactgcatcttctgctggtccacgctatgcaccagaggaccccacc
cttcccaaaccttggaaaggcctagttgatggtaaaactggatatctctatttttggaat
ccagagaccaatactacccaatacgagaggcctgttgctatttctcatgggggtactgca
caacataaatcatccgtatctgtaagttcatcagttgagaggccttctcaaagtcaacat
cctgaccgtgatgacaacagaggtaccaatggtggcttgagcaagctttcctctggagag
ggtattcagactgcaagaggaaatgagcattcccgtgatggaacatctgcgcctaaaggt
tatagtgttccagctgctggaagtgacatatctccagatgcctatcgccgtcagcatgaa
atttctgttacaggaggtgatgtgcccccacctttcacatcgtttgaagctactgggttt
ccttcggagattttgagggagatacatcaagctgggtttcctgctccttccccaatacag
gcacagtcctggcccattgcacttcagggccgtgacatagtagctgttgcaaagactggg
tctgggaaaactttgggtttcttgcttcctggctttattcttctaaagcaacgtcggagt
aatcctcaatcaggccctactattttggttttgtcgccaacaagagaattagccacacag
atacaagacgaagctgttaagtttggtagatcttcaaagatatcttgcacgtgtttatat
ggaggcgccccaaaaggccctcaactacgagatctggacagaggagttgatattgttgta
gctacccctggtcgtttgaatgatattttggagatgagaagagttaggctggatcaagtt
tcttacttggtgttagatgaagcggatcgtatgctggacatgggatttgaacctcagata
cggaagattgtgaaggaagtgcctacgcggcggcagacactgatgtacacagcaacatgg
ccaaaggaggtccgcagaattgcagctgatctattggttaatcctgttcaggttaacatt
gggaatgttgatgagcttgttgcgaacaagtctataacacagtacattgaagtcttatca
tatatggataaacaaaagcggctagaccagatcttgagatcccaagagcctggatcaaaa
atcattatcttctgttcaacaaagaaaatgtgtgaccgacttgctcagaatcttacacgc
ccatttggagctgctgcaattcatggtgataaatctcagggtgaaagggatcatgtattg
agccagttccgcactggcaggtcccccgttcttgttgctactgatgttgctgctcggggc
ttggatgtcaaagatatcagggtggtggtcaactatgattttcctactggaatagaggat
tatgtacacagaataggaagaactggtcgggctggtgcgactggtgaggcctacacattt
ttttgtgaccaggatgctaaacatgcttcagatcttattaaagttttagaaggagcaaat
cagcaagtgcctactgaactacgtgatatggcttcccgaggtggtggtatgggaaaggct
aggcgtcaatgggattctggctcaggtggacgtgaaggaggacatgggggacgttatgat
gctggctatggtggacgaggtggaggaaggggtggttgggaagtcccgtcatcggaaaga
agtggacgtgtttacgactcggattcacgtgacagtgatagaaatggtgatggatctcgt
gataccgaggctccagtgagtttccatgctcgtagcttccacgagactatgatgcaggct
tcacagagaggtgatcgaagtcggagcagaagcccaaatagaggttctggatggggtgat
aggaaaagcagggagcgcagtcgtagccctagtgctgaaagatatcgggctcctcttcaa
gtcccagtaggacgcagtttccatgaaagcatgatggcctgtggtagatcagctggtgat
ttcagagaaaaagttggagggtcatatgatgattgccaaaaggactgggaaaaagagaga
tctccacgtagatggcaaggtgatgggaaatctggcaatagaccccgtgctaacaatggg
gaggaggaagaaggtatgtttcctgaagggagatga

DBGET integrated database retrieval system