Solanum dulcamara (climbing nightshade): 129874166
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Entry
129874166 CDS
T09577
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129874166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129874166
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
129874166
Prokaryotic type
Archaeal type
TFB
129874166
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
129874166
NCBI-ProteinID:
XP_055805388
LinkDB
All DBs
Position
11:complement(54497615..54501601)
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AA seq
425 aa
AA seq
DB search
MRCPYCSAVQGRCNSSTSGRPITECTSCGRVVEERLTQSHHLFHTRAQDSPLCLATSDLP
TPPISATNDDEDPFEPTGFITAFSTWSLEPYPVFAQSSISFAGHLAELERVLETTSSSSS
ASSSSVVVENLRAYLQIIDVASILRLDYDISDHAFQLFRDCSSATCLRNRSVEALATAAL
VHAIREAQEPRTLQEISVAANLPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLL
QLNKSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTE
VTLRKVYKELLENWDDLLPSSYKPVVPPEKAFPSAIIDTGRSSTPRVDIVEGTSAERDKP
VKPVDSLDVSSQIRGKEDSHSKDNINTTQISWPPPFWKPQAPAEGGVKTATEKSQNATQE
MEIDL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgtccgtactgctcggcggtgcaagggcggtgcaacagcagtaccagcggcaga
ccgataacagagtgcacatcctgcggccgtgtagtggaggagcgattgacccaatctcac
catctttttcatacccgtgcacaagattctcctctgtgcctggccacttccgatctcccc
actcctcccatctccgccactaacgacgatgaagacccatttgaacccactggtttcatc
accgctttctctacttggtctctcgaaccctacccagtatttgcccaatcctccatttcc
ttcgccggccatcttgcagagctcgagcgggtcctcgaaacgacgtcgtcttcctccagt
gcgtcatcttcctctgtcgtggtggagaatctccgggcttatttgcagattattgatgtg
gcttccattttgcgactggattatgatatatcggaccacgcttttcagctcttcagggat
tgttcttcggcaacttgcttaaggaatcggagtgttgaagcgcttgctactgctgctctt
gtacacgctatcagagaagcccaagagccaagaactctccaggaaatatcagttgcagcc
aatttacctcagaaggaaatcgggaagtacataaagattcttggagaagcattacaactc
agtcaacctatcaatagtaattctatatcagtccatatgccaaggttttgtacacttctt
cagctgaataaatctgctcaggagctggcgactcacattggtgaagtaatcatcaataaa
tgcttttgcacgcgaaggaatccaattagtatctctgctgctgctatatatttggcatgt
caactggaagacaagcggaagacccaggctgaaatatgtaaggtgactggactcaccgag
gttactcttcgtaaggtgtacaaggagcttttggagaactgggatgatctcctaccatca
agttataaaccagttgttccaccagagaaggcttttccttcagctatcattgatacaggc
cgttcatcaacacctagagttgatatagttgagggaacttcggctgagagggataagcct
gttaaaccagtcgactcattagatgtatcttctcagatcagaggcaaggaggattcccat
agcaaagataatattaatacaactcaaatatcttggccaccaccattttggaagcctcaa
gctcctgctgaaggtggtgttaaaacagctacagagaagagtcagaatgctactcaagaa
atggagattgatttatga
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