Solanum dulcamara (climbing nightshade): 129874339
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Entry
129874339 CDS
T09577
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129874339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129874339
Membrane trafficking [BR:
sdul04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
129874339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
129874339
NCBI-ProteinID:
XP_055805575
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All DBs
Position
11:complement(40304870..40313539)
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AA seq
1448 aa
AA seq
DB search
MMGCLNQQSEVNSSFSEPKDCTLKPSKGALACIINSEIGAVLAVMRRNVRWGFRYAAADD
NLEHPLIHSFKELRRSIFSWQHHWNRVDPLLYLQPFLDVIQSDETGAPITGVALSSVYKF
LTLEIIDSSIMNVEKALHQIVETVTSCRFEVTDPASEEVVLMKIFQVLLACMKSKASANL
SNHHVCNIVNTSFRLVHQASAKSELLQRIARHTMHELVRHIFSHLPNIVSKAHEFDQQSR
LCADPEAGGKQHDNGCVSAESTGKSASAAVPSNASDKGDETTDEKTQKEVAINRENPMMD
PYGVPCMVEIFHFLCSLLNLMESIEIGSRSNPIAYDEDVPLFALGLINSAIEVSGASSGN
HPELLALIQKDLFHNLMRFGLSMSPLILSTVCSIVLNLYHHMRIKLKLQLETFFSGVLLR
IAQSKHGASYQQQEVAIETLVDFCRQSMFMPEMYANFDCDISCSNVFEDLSNLLSKSSFP
VNIPLSALNTLALDGLIAMMQGMANRISQDSFVSEQASIDLGEYRSFWTEICKDYSDPNH
WVPFVRKMKLIKRKLLIGVDHFNRDPKKGMEFLQGVHLLPEKRDPKSVAYFFRYMTGLDK
NLIGDFLGSHEDFYTEVLHEFAGTFDFRDMNLDIALRIFLETFRLPGESQKIQRVLEAFA
ERYYEQSQNILADKDAALLLSYSIIMLNTDQHNAQVKKKMTEEDFIRNNRRINGGNDLPR
EFLSKLYHSICEDEIRITPERGAGSPMMAPSHWIGLVHKSRQTSPYIVCDPGPYLDYDMF
TMLSGPAIAAISVVFDNVEQEDVWKACINGFLAIAKIAAAYSFDDVLNDLVVSLCKFTTL
LLPSYVDEFTVAFAEDGKARLVTLAVFTIANKYGDHIRSGWKNILDCILSLHKLGLLPTR
LFSDAADDLESTADADPRRPTALSPSPSHFPSLAPSRKSSGLMGVFSQLLYLDEEPAPQP
TEQQLAARQQTLQTIQSCHIDSFFAESKFLQAESLLQLVRALVLAAGKPRKRNNSLEDEE
TAVFCLELLIAITINNRDRIMLLWQVVYDHIESVVHFTTMPSTLVEKAVFGLLRICQRLL
PYKENLTDELLKSLQLILKLDARVADAFLEQITREVMHIVKANAMQIRSHIGWRTIISLL
SFAARHPEASETGFDTLAFIMADGAHLLPANYVLCLNVAAQFADSHVGNVDQSVRSLDLM
AGSLISLIRWSHKAKEALGQAAAVKMTQDITEMWLRLIQGLRKFCKDRREEVRDHAILML
QRCLTGVDGIHIPEDLWLQCFDQVIFTLVDELLNLSQPSSVKDYRSTEGAIVLALKLMFK
MFLESLHHLCQSASFCKLWLGVLTLTERCMKVKFKGKRSEKIPELISELLKNTLLVMKTS
GILGPSNPVGGDSFWKSTWLHVHKIFPSLQSEIFPTNEVEQLEKQHVQAGCSPLTEGNVI
VSSDNSTA
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgatggggtgccttaatcagcagagtgaagtcaattcttcattttcagaacccaaggat
tgtactctaaagccttccaaaggtgccttagcatgtataataaattcagaaattggtgct
gttttggccgttatgaggagaaatgtaaggtgggggttccgttatgctgctgctgatgat
aatctagagcatcctctcatccattctttcaaggaattacggagaagtatcttctcatgg
caacatcactggaacagagttgatccactcctatatcttcagcctttcttggatgtgatt
caatctgatgaaactggtgcaccaataaccggtgttgcattgtcttctgtatacaaattc
ttaacccttgaaataattgattcatctatcatgaatgtggagaaagctttacatcagata
gttgagaccgtgacaagttgccgctttgaagtgactgatcctgcctctgaggaagtggtg
ctgatgaagatatttcaggttcttttggcttgcatgaaaagtaaggcatcagcaaatttg
agtaatcatcacgtatgcaacattgtaaacactagctttcggcttgttcatcaagctagt
gccaaaagtgaactgctgcagagaatagcaagacacacaatgcatgaattggtgagacat
attttctctcacctgcctaacattgtcagcaaagcgcatgaatttgatcagcaaagcaga
ttgtgtgctgacccagaggcaggcggaaaacaacatgacaatggttgtgttagtgcagaa
tccactggtaagtcagcatcggctgcagttccttccaacgcatcagacaagggggatgaa
acaacggatgagaaaactcaaaaggaggttgctattaatagagaaaaccctatgatggat
ccatatggggtcccctgcatggtggagatatttcatttcctgtgttcacttctgaatctt
atggagtccattgaaattggttctagatccaaccctatagcatatgatgaagatgttccc
ttgtttgcactggggttaattaattcagccatagaagtaagtggtgcttcttctggaaat
catcctgagttattggctctgatacagaaagacttgttccacaatctgatgcgttttggc
ttgtctatgagtcctttaattctttcaacggtttgtagcattgttctaaatttgtatcat
catatgcgtattaagttaaagctacagcttgaaactttcttctctggtgtgttattgagg
attgcccaaagcaagcatggagcttcttatcaacagcaagaggttgccatagaaactctt
gttgacttctgtaggcagtccatgttcatgcctgagatgtatgcaaattttgattgtgac
atatcttgcagcaatgtatttgaagacctttcaaacctattatccaaaagttcctttccg
gtcaacatcccactatcagctttaaatacgcttgccttggatggtctaattgccatgatg
cagggtatggccaatagaataagccaggattcatttgtttctgaacaagcttcaatagat
ctgggtgaatatagatcattttggacagagatatgcaaggactacagtgatcctaatcat
tgggttccatttgttcgtaagatgaagcttataaagaggaaattgttgattggagttgat
cactttaaccgagatccaaaaaagggtatggaatttctccaaggagtgcatttgttacct
gagaaacgtgacccaaaaagtgtagcatactttttcaggtatatgactggcttagataag
aatcttatcggggatttcctaggaagtcatgaagacttctatactgaagtgcttcatgaa
tttgctggaacatttgattttcgggacatgaacttagacatagccttgcgaatcttttta
gaaaccttcagattgcctggagagtcgcagaaaatacagagggtgcttgaggcatttgct
gagagatactacgagcagtcgcaaaatattctggctgacaaagatgctgcactattattg
tcatattcaattattatgctcaacacagatcaacacaatgcccaggtaaaaaagaagatg
actgaggaagatttcatccgcaacaaccggaggattaacggaggaaatgacctccctcgg
gaatttttgtccaagctttaccactccatctgtgaggatgagatccggattaccccagaa
cgaggtgctggtagtccaatgatggcaccaagccattggattggtctagttcataaatca
aggcaaacttccccatatattgtctgtgatcctggtccttatctggattatgatatgttt
actatgttgtctggtcctgcaattgctgccatctctgtggtttttgataatgtggagcaa
gaggatgtttggaaagcatgtatcaatggattccttgccattgccaaaattgcagctgcc
tatagcttcgatgatgtgttaaatgatttggtagtatctctttgcaagttcactaccctt
ttgcttccatcttatgttgatgaatttaccgttgcatttgcggaagatggtaaagctaga
ttggtcacattagcagtcttcacaatagcaaacaaatatggagaccacattcgctctggt
tggaagaatatcctagactgcattttgagtttgcacaaattgggccttctccccacacgt
ctctttagtgatgctgctgatgacttagagtctactgctgatgcggaccctaggagacct
actgcactttctccatcaccatctcattttccttcattggctccatcaaggaaatcatct
ggcttaatgggcgtatttagccaactattatatcttgatgaagaacctgcaccacagcca
actgaacaacagcttgctgcacgtcagcagactcttcagacaattcagagttgtcacatt
gatagcttctttgctgagagtaaattcttgcaagctgagtccttgttacagcttgttcgg
gcccttgtgttggctgcaggcaagcctcgcaaacgaaataactctttggaagacgaagag
actgcagtattttgtctagagttacttattgctatcacaataaataaccgggacagaata
atgcttctttggcaggttgtctatgatcacatagaaagtgttgtccattttacaactatg
ccgtctactttggtagagaaagctgtgtttggtctgcttcgcatatgccaaaggttgctt
ccatacaaggaaaatctcacagatgagcttctcaagtctctgcaacttatcttaaagctt
gatgctcgggttgctgatgcatttcttgaacagataacccgggaggttatgcacattgtc
aaagcaaatgctatgcagatacgatctcatataggctggcggacaattatatctctgctt
tcttttgctgctcggcatccagaagcatctgaaacaggatttgatacactagcgttcatc
atggctgatggggcccacctcttgcctgctaattatgtcctctgtttgaatgtggcggca
cagtttgctgattcccatgttgggaatgttgatcaatctgtgagatctttagacctgatg
gctggatcacttatctctcttattagatggtctcacaaggcaaaggaagcacttgggcag
gcggctgctgttaaaatgacccaggatataacagaaatgtggctcaggctgatacaggga
ctgcggaaattttgtaaagaccggagagaagaggtaagggatcatgccatcttgatgctg
cagaggtgcttgactggagttgatgggatccatatcccagaagatttgtggttgcaatgt
tttgatcaggtgatatttacattagtggatgaattactcaatctttcccagccgagctct
gtgaaggattataggagcactgaaggagcaatagttttggcactgaagctcatgttcaaa
atgtttttagagtctttgcatcatctctgccagtcggcatccttctgcaaactatggtta
ggggtattgactcttacagagagatgcatgaaggtgaaatttaaagggaaacggagtgag
aagatacctgaactcatttccgaactcctaaagaacactctacttgtcatgaaaacaagt
ggaattctggggccaagtaatcctgtaggaggggatagtttctggaagtcaacatggttg
catgtccacaaaatattcccatcccttcagtcagaaatctttcccacaaatgaagtagag
cagttggagaaacagcatgtccaagcaggttgtagtcctctgacagagggaaatgtcatc
gtctcgtctgataatagcacagcttga
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