Solanum dulcamara (climbing nightshade): 129874429
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Entry
129874429 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129874429 isoform X1
KO
K24755
WD repeat-containing protein 76
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129874429
03036 Chromosome and associated proteins [BR:
sdul03036
]
129874429
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129874429
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129874429
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129874429
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
129874429
DSBR (double strand breaks repair)
Other DSBR factors
Others
129874429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
129874429
NCBI-ProteinID:
XP_055805690
LinkDB
All DBs
Position
11:complement(17470490..17474209)
Genome browser
AA seq
494 aa
AA seq
DB search
MAAGELTDYERRRIENIKRNEEMLASLKIQSRISELSAVTKRPRAQSKSYQASPQKKQKS
KSPVVLRRSLRTQGIPPESSTASGLKDDFDDIPGRIAPNKNSQPTDKKSLREPLPLSMRD
AFNGDSDIPNKKLIKTIKGFSHKIDDESMDKNSVLGDWIEKRKPSDAVNLESLKLEPDNI
ARVVPGRILNVHFFPTNNVRMVAVGNKFGNIGFWNVDAPQEDGDAIYLYHPHSGPVSGIL
VDPFSVSKMFTSCYDGFIRVMDIEKEMFGLAYLSEHPIFSISLRPHDMKSIYYGEGSGEL
GILDLRTGKSSASWKLHDERINTIDFTSENCNIMATSSTDGSACIWDLRKVGAHKPKSLQ
TVFHKRAVHSAYFSPSGRFLATTSIDNNVGLLSGANYEDTSMISHYNHTNRWISSFRGIW
GWDDSYIYIGNIQRGVDVISVADKKLDFTLRSEHMTAIPCRFDAHHEEVGMLAGATSGGQ
VYIWTASLVGGCRS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggggaattgacggattacgagcggcgaaggattgagaatataaagcgcaat
gaagaaatgcttgcgtcccttaagattcagtcccgaatttctgaactttccgcagtaacc
aagcgtccaagagctcaaagcaaatcatatcaggcaagtccacagaagaaacaaaagtct
aaatcacccgttgtgctgcgacggtctctcaggactcaaggtattccaccggaatcttct
accgccagtgggctaaaagatgattttgatgatatcccaggtaggatagcacctaacaag
aactcacaacccactgacaaaaagtcacttcgagaacctcttcccctaagtatgagagat
gcatttaatggggactctgatatcccaaataaaaaactgattaaaactattaagggtttc
tctcataagattgacgatgagagcatggataaaaattctgttttaggtgactggatagag
aaaagaaagccttctgatgcagttaatttggaatcattgaagttggaaccagacaacata
gcacgggttgtaccaggacgaatattaaatgtgcatttttttcccaccaacaatgttcga
atggttgctgtagggaacaaatttggcaatataggtttctggaatgttgatgctccacag
gaggatggagatgcgatttatttgtaccatcctcattcggggccagtttcaggaatactt
gtggaccctttttctgtgtcaaagatgttcacttcttgctatgatggatttatcagggtg
atggacattgaaaaggaaatgtttggtttggcatatttgagtgaacatcccatattttcc
atatcactgagaccacatgatatgaagtccatatattatggtgaaggcagtggggaactt
ggtattttggatctaaggacaggaaaatcttcagcatcgtggaaattgcatgacgaaagg
atcaacacaatagattttacctctgaaaactgtaatattatggcaactagttctacagat
ggtagtgcatgcatttgggatttgagaaaagttggtgcccataaaccaaaatctttgcaa
actgtcttccacaaaagagcagtgcactcggcttacttttcaccttctggaaggtttctt
gccacaacaagtattgataataatgttggtttgttgagtggcgctaattatgaagataca
tctatgatctcccattataatcacacaaacagatggatttcctcattcagaggaatatgg
ggttgggatgattcctacatctacattggtaatattcaaagaggagttgatgtaatctca
gtagctgacaagaaacttgattttaccttacgaagcgaacacatgactgctattccatgc
cgttttgatgcacatcatgaagaagttggaatgcttgcaggggctacaagtggtgggcag
gtatatatctggacagcatctttagttggtggctgtagatcctag
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