KEGG   Solanum dulcamara (climbing nightshade): 129874433
Entry
129874433         CDS       T09577                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    129874433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sdul03036]
    129874433
Chromosome and associated proteins [BR:sdul03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     129874433
    NSL complex
     129874433
   HMT complexes
    COMPASS/SET1 complex
     129874433
    COMPASS/SET1 complex (yeast)
     129874433
    MLL-HCF complex
     129874433
    MLL3/MLL4 complex
     129874433
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     129874433
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_SPT8 eIF2A Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st RMC1_N WD40_like Beta-prop_NUP159_NUP214 Beta-prop_HPS5 PROPPIN Beta-prop_Vps41 WD_LRWD1 Beta-prop_DCAF12 VPS8_N Ge1_WD40 Beta-prop_RIG_1st Beta-prop_VPS8 Big_7 Beta-prop_NOL10_N DUF5888 HPS6 WDR54 Cytochrom_D1 ZP1_ZP4_Ig-like
Other DBs
NCBI-GeneID: 129874433
NCBI-ProteinID: XP_055805695
LinkDB
Position
11:56068558..56075340
AA seq 314 aa
MTSTIETTESFKPYELKFTLSGHKRAISSVKFSDDGKILATSSADKTARTWDVSDGSLLH
EFLGHEQGISDVAFSSDGRHLATASDDKTVRLWDVSTGSHIKTLTGHTNYVFCVNFNPQT
NMLVSGSFDETVRLWDVKTGKCLKVLPAHSDPVTAVNFNRDGSLIVSSSYDGLCRIWDAS
TGHCMKTIIDDENPPVSFVKFSPNGKFMLVGTLDNALRLWNFSTGKVLKTYTDHVNSKFC
ISSTFSITNGKYIVSGSEDNCIYLWELQSRKIVQKLEGHTDTVISVSCNPTQNMIASGSL
GNDKTVKIWTQGED
NT seq 945 nt   +upstreamnt  +downstreamnt
atgacttcaactatcgagactactgaatctttcaaaccctacgagcttaaattcactctc
tccggccacaaacgcgccatctctagcgtcaaattctccgacgatggaaaaatcctagcc
acctcctccgccgacaaaactgcccgaacatgggatgtctccgacggttcccttcttcac
gaattcctaggtcacgaacagggtatctccgatgttgccttctcctccgacggccgtcac
ctagctactgcctccgatgacaaaactgtccgattatgggacgtttccaccggctcccat
atcaaaaccctgacaggtcacacaaattatgttttttgtgttaacttcaatccccaaact
aatatgttggtttctgggtcgttcgatgagacggttaggttgtgggatgtgaagactggg
aagtgtctcaaggtgcttccggcgcattcggatcctgtgactgctgtgaattttaatcgg
gatgggtcgttgattgtgtcgagcagctatgatgggttgtgtagaatttgggatgcatca
accgggcattgtatgaagaccattattgatgatgaaaacccacctgtgagttttgtcaag
ttctcacccaatggcaaatttatgctcgttggcacgctagataatgctctgaggctttgg
aacttctcgacaggaaaagttctgaaaacgtacacggaccatgtcaactcgaagttctgc
atttcatcaacattttccataacaaatgggaaatatatcgttagtggttctgaggataat
tgtatatacttgtgggaacttcaatcaaggaagatagttcaaaaattggaaggccatact
gataccgtgatttctgtatcatgcaaccccactcagaacatgattgcttctggttctctt
gggaatgacaagactgtgaagatatggactcagggggaagactaa

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