KEGG   Solanum dulcamara (climbing nightshade): 129874496
Entry
129874496         CDS       T09577                                 
Name
(RefSeq) glycine-rich RNA-binding protein 3, mitochondrial-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129874496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129874496
   03041 Spliceosome [BR:sdul03041]
    129874496
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     129874496
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129874496
Spliceosome [BR:sdul03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    129874496
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_MARF1 RRM_5
Other DBs
NCBI-GeneID: 129874496
NCBI-ProteinID: XP_055805765
LinkDB
Position
11:59591696..59594533
AA seq 335 aa
MAFLNKIGNILKHGVGKNTNLELSASNASLFQTIRSMSSSKLFVGGLSYGTDESSLKEAF
AQYGEVIEARIILDRDTGRSRGFGFISFPSSEEATSAMQSMDGQDLHGRRIKVNYATEKR
RDGFGGGYGGGGGYNYGGEGGNFAGGGGYAAGNYGGGGGGYSGGYNSAGGGGYDSSSGYN
YGGEGGNSAGAGGYPTNNYGGGGGGFSTVNSSAGGYGSYGGGSSNYGNNNSSPVDSGNYG
SSTPNINYSGQGSSFAGGYGGGNSGNDLFGAPSNNNGFANSGFGGSSEASYNGGQEQLSA
DQGTESINEHLGQESSEANYRDDDDEPKDYANTRG
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcttttctcaataaaattgggaatattctcaaacatggtgtaggcaaaaacacaaac
ttggaactctctgcctcaaatgcttcacttttccagactataagaagcatgtcttcgtct
aagctttttgttgggggtctctcgtatggcactgatgagagctctctgaaagaggcattc
gctcaatatggtgaagtaattgaagctagaattattctggatcgtgatactgggaggtcc
agaggatttggttttattagttttccatcaagtgaagaagcaacaagtgccatgcagtcc
atggatggccaggatcttcatggaagacggataaaggtgaattatgccacagaaaaacgt
cgtgatggttttggaggtggctatggtggcggtggtggttataactatggtggagaaggt
ggaaactttgcaggtggtggaggttatgcagctggtaattatggaggtggaggtggtgga
tattctggtggttacaattctgctggaggaggtggctacgatagcagtagtggctataac
tatggtggggaaggtggaaattctgccggtgctggaggttacccaaccaacaattacggt
ggtggagggggtggattttctactgttaacagttctgctggaggatatggtagctatggt
ggtggtagtagcaattatgggaacaacaacagttcccctgttgacagtggtaactatgga
agcagcactccaaacatcaattattctggtcaaggcagtagttttgcaggtggttatggc
ggtggcaacagtgggaatgacttgtttggagctcctagtaacaataatggctttgctaac
tcgggatttggtgggagctctgaagcatcatataatggaggccaagaacagcttagtgca
gatcaaggaactgaatctataaatgaacatcttggacaggagtcatcagaagcaaactac
agggatgatgatgacgaaccaaaggattacgccaacaccaggggctga

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