Solanum dulcamara (climbing nightshade): 129874512
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Entry
129874512 CDS
T09577
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00500
Starch and sucrose metabolism
sdul01100
Metabolic pathways
sdul01110
Biosynthesis of secondary metabolites
Module
sdul_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
129874512
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdul01003
]
129874512
Enzymes [BR:
sdul01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
129874512
Glycosyltransferases [BR:
sdul01003
]
Polysaccharide
Storage polysaccharide
129874512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
129874512
NCBI-ProteinID:
XP_055805779
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All DBs
Position
11:complement(44791598..44803171)
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AA seq
1001 aa
AA seq
DB search
MEMKISNCFTTQKWCGGAPFSRQVNVRFYPLPSQRLQPASGKIRQRRNLSLQNKKQQTKK
INIECPPDVDLQSSDDVDSNTEKMSKQSLSSSNQEISIEEKVATLTETKSSDEISYLSVD
SNEEGQPSSVHLQDLIVMIRNAEKNIHQINEARVHVLEELQKVLGEKEGLHEEIKILEMK
LAETDAVLRVAAQEKIHVKLLEDQLEKLKNELTSSRGSEENVLHVNNSVPLSHSDTVNSL
SEELDSLRKENILLKKDLQAMKSELSLVKETDEHILMLEKERSVLESSLSELESKLAASQ
EDVSELSALKLECKNLYEKVEHLQMLLAKATKQADQAITVLQQNQELLKKVDRLEESLEE
ASIYKLSSEKLQQYNEQMQQKIKLLDERLQRSDEEIQSYVQLYQDSVKEFQDTLDNLKKE
TKKKPLDEPVNDMPWEFWSRLLLMIEGWSMEKKISKDDAKLLRELVWKRDGRICDAYMSC
KEKNDHEILAAFLRFTSSPTRPGLHIIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLV
EIVLPKYDCMQYESIKDMKVLDVVVESYFDGRLYKNNIWTGTVEGLPVYFIEPQHPGKFF
CRGQLYGEHDDFKRFSFFSRVALELLLQAEKRPDIIHCHEWQTAFVAPLYWEIYVPKGLD
SARICFTCHNFEYQGTAPASELTSCGLDAYHLNRPDRMQDNSANDRINPVKGAIVFSNIV
TTVSPTYAQEVRSAQGGKGLHATINSHSKKFAGILNGIDTDAWNPTSDNFLKVQYSASDI
DGKIENKEALRRLLGLSSSDFRRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGS
SPVPHIQREFEDIGNHFQNHKHARLVLKYDEALSHLIYAASDMLIVPSIFEPCGLTQMIA
MRYGSIPIARKTGGLNDSVFDIDDDSIPIQFRNGFTFVTADEQGFNNALERAFNYYMNNT
ETWKELVQKDMSIDFSWDSSASQYEELYEKAVLRARAASRS
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaagatctccaactgttttacgacgcaaaaatggtgcggaggagcacctttt
tctaggcaagtaaatgttcgattctatccactaccttctcaacgcctgcaaccagcttcc
ggcaaaattcgccagcgccgcaatttaagtttgcagaacaagaaacaacaaaccaagaag
ataaatattgaatgcccaccagatgttgatcttcagtcaagtgatgatgtagattccaat
actgaaaagatgtccaaacaaagcctatcaagttcaaatcaggaaatttcaatcgaagaa
aaagttgccactttgacggaaaccaaaagttcagatgagattagttatttgtccgtcgat
tcaaatgaggagggacaaccttcaagtgttcatcttcaggatctgattgtcatgataaga
aatgcggaaaagaatattcatcaaatcaatgaagctcgtgtccatgtgttagaagaactt
caaaaagttcttggagagaaagaaggtttgcatgaggagatcaaaattttagaaatgaag
ctggcagaaactgatgcagtgctcagagttgctgcccaagaaaaaatacacgtgaaactt
ctagaagaccagttggaaaagctgaaaaatgaattgactagcagcagaggcagtgaggaa
aatgtgcttcatgtgaataattcagttcctctttcacatagtgatactgttaattcattg
agtgaggaattggattcattaaggaaagaaaatatattattgaagaaagatcttcaagcg
atgaagtcagagcttagcttagtcaaggaaacagatgaacacatcttaatgctagagaaa
gaacgatcagttcttgaatcttctttaagtgagttggaatctaaactggctgcatctcag
gaagatgtttcagagctctctgctttaaaattggagtgcaaaaatttatatgaaaaggtg
gaacacttacaaatgttgctagctaaggcaaccaaacaagcagatcaagcaataacagtg
ctacagcaaaaccaagagctactgaaaaaggttgacaggcttgaagaatctcttgaagag
gctagcatctataagctttcatctgaaaagttacagcagtataatgaacaaatgcagcag
aagataaaacttcttgatgaacgccttcagaggtctgatgaagagatacaatcttatgtc
cagctgtatcaggattctgtcaaggagtttcaagatacacttgataatttgaaaaaggaa
actaaaaaaaaacctctagatgaacctgtaaacgatatgccttgggaattttggagtcga
ttgttgttgatgattgaaggttggtctatggaaaagaaaatctcaaaggatgatgcaaaa
ttgttaagagaactggtctggaagagagatggacgtatctgtgatgcatatatgtcatgc
aaggagaagaatgatcatgaaattctagcggcatttctcagatttacttcatcaccaaca
cgtccaggactgcatatcatccatattgcagccgagatggcgcctgttgcaaaggtaggt
ggtctaggggatgtggtggcaggtcttggcaaagctctgcagaagaaaggacaccttgtg
gaaattgttcttcctaaatatgattgtatgcagtacgagtcaattaaggacatgaaggtg
ttagatgtggtggttgagtcatattttgatggtcggttatacaaaaataatatctggacg
ggcactgttgaaggccttccagtttattttattgagcctcagcatcctggtaaattcttc
tgtagaggacaactttatggagagcacgatgatttcaaacgattttcattctttagcagg
gtagcacttgaattactacttcaggctgaaaagagaccagatataattcattgccatgaa
tggcaaacagcttttgttgcaccactttattgggaaatatatgtgccgaaaggattggac
tcagcgaggatttgttttacatgccataattttgagtatcaagggactgcaccggcatca
gaattaacatcttgcggtcttgatgcttatcacttgaacagaccagataggatgcaggac
aattcagcaaacgatagaataaatcccgtgaagggtgcaattgtgttttctaacattgtt
accacagtttcaccaacttatgctcaagaggtccgctctgctcagggaggaaaaggacta
catgcaacaattaactcccattctaagaagtttgctggaattctgaatggaattgatact
gatgcttggaatccaacttctgataattttcttaaggtccaatatagtgccagtgacata
gatggaaaaatagaaaataaagaagctttaagaagacttctagggctctcttcttctgac
tttagacgaccattggttggttgcataacaagactggttcctcaaaagggcgtgcatctt
attagacatgccatatataggactttggagttgggaggtcaatttgttcttcttggttct
agcccagtgccgcatattcagagggagtttgaggatattggaaaccatttccaaaatcac
aagcatgctcggttggtattgaagtatgatgaggctctttcccatttgatatatgcagca
tctgacatgcttattgtcccttccatctttgagccttgcggccttactcagatgatagcg
atgagatatgggtcaataccaatagctaggaaaacagggggcttgaatgatagtgttttt
gatattgacgatgactcaatcccaattcagtttagaaatggatttacatttgtgactgct
gatgaacagggattcaacaatgccttggaacgtgcatttaactattacatgaacaatact
gagacttggaaagagcttgttcagaaggacatgagcatagattttagttgggattcatca
gcatcacaatatgaagaactttacgagaaggctgtgttgagagcaagagctgctagtcgt
agttga
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