KEGG   Solanum dulcamara (climbing nightshade): 129874560
Entry
129874560         CDS       T09577                                 
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sdul03000]
    129874560
   03036 Chromosome and associated proteins [BR:sdul03036]
    129874560
Transcription factors [BR:sdul03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    129874560
Chromosome and associated proteins [BR:sdul03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     129874560
SSDB
Motif
Pfam: PH1_SSRP1-like POB3_N SSrecog HMG_box Rttp106-like_middle HMG_box_2 HMG_WDHD1 CDC45 YL1 MlaC
Other DBs
NCBI-GeneID: 129874560
NCBI-ProteinID: XP_055805831
LinkDB
Position
11:60529703..60537386
AA seq 639 aa
MTDGHQFNNISLGGRGGTNTGQLKVQSGGILWKKQGGGKAVEVDKEDIVGLTWMKVPRSN
QLGVRIKDGLYYKFTGFRDQDVASLTTYFQNSCGISPEEKQLSISGKNWGEVDLNGNMLA
FLVGSKQAFEISLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFDGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRIFLLPKHNQPHTLVVITLDPPIRKGQTLYPHIVLQFETDNVVDLSLALS
EDLLNTKYKERLLTSYKGLIHDIFTQILRGLSGSKVTKPGKFRSSQDGYAVKSSLKAEDG
LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGTANMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLNEARATEGVPVLPDDDDDAVDPHLERIKNEAGGDDSDEE
DEDFILDKDDGGSPTDDSGGDESDASGSGGEEEKPAKKKPKKETTVSKPSTSRKKADDDG
SKKKKQKKKKDPNAPKRAISAFMYFSQSERENVKKSNPGISFTDVGKVLGERWNKLSAEE
KEPFEAMAKADKKRYSEQISDYKNPQPTAMDSGNESGSS
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgacggacggtcaccagttcaacaacatctctctcggcggccgtggaggcaccaataca
gggcaactcaaggttcagtctggaggtatattatggaagaaacaaggtggtggtaaggct
gtggaagttgacaaggaggatatagtgggccttacatggatgaaagttcctcgatctaat
cagcttggtgtgcggattaaggatggtctttactacaaatttactggctttcgtgaccag
gatgttgcgagtttgaccacctatttccagaattcgtgcgggatatctccagaggaaaag
cagctatcaattagtggaaaaaattggggagaagttgatctaaatgggaatatgcttgct
tttcttgttggttctaagcaagcatttgaaatatcattagcagatgtttctcaaacacag
cttcaaggaaaaaatgatgtcatgttggagttccatgtagatgatacaactggggctaat
gagaaagactcactgatggaaatcagctttcatatccctaattcaaacactcaatttgtt
ggtgatgaaaaccgacctcctgctcaagtttttcgggacaaaatcatgtcaatggctgat
gtcggtgccggaggtgaggaggctgttgtcacatttgacggcattgcaatacttactcca
aggggtcgttacaatgttgagcttcatctctcattcttgcgcctgcaagggcaagcaaat
gactttaaaattcagtacagcagcgtagtccgtatttttttgttgccaaagcataaccaa
ccacacactttagtagtcatcactcttgatcctccgattaggaagggccaaactttgtat
ccgcacattgtattgcagtttgagacggacaatgtggtagacctttcgctggctttaagc
gaagatcttttaaatacgaaatacaaggagaggctactaacgagttacaagggtcttatc
catgacatctttactcaaattttacgcggcttgtctggttccaaagtcactaaaccaggg
aagttccgtagcagtcaagatgggtatgcggtgaagtcctcattgaaggctgaagatgga
ctcctctatcctcttgagaagagctttttctttttacctaaacctccaactcttatactg
catgaggagattgattatgtggagtttgagaggcacgctgcgggcacggccaacatgcat
tactttgatcttctcatcagactgaaaactgaacaagaacatcttttccggaatatccag
aggaatgagtaccacaatcttttcgatttcatcagtggaaagggtctgaaaataatgaac
cttaatgaagctcgggctacagaaggtgttcctgtattgcccgatgatgacgatgatgct
gttgatccacatcttgagcgtattaagaatgaagcgggtggggatgacagtgatgaagag
gacgaagattttatcctcgataaggatgatggagggtctcctactgatgattctggaggg
gatgaatctgatgccagtggtagtggtggtgaggaggagaaacctgcaaagaagaagcca
aaaaaggagactactgtgtcaaagccatctacaagcaggaaaaaggcagatgatgatgga
tcaaagaagaaaaaacagaagaaaaagaaggatccaaatgctccgaagagggcgattagt
gctttcatgtacttctcgcagagtgaaagggagaatgtgaagaaaagtaatcctggaatc
agcttcactgacgttgggaaggttcttggagagagatggaataagttgtcagctgaggag
aaagaaccctttgaggcaatggccaaggcagataagaagcgctacagcgaacagatcagt
gattacaagaaccctcagccgactgccatggattcagggaatgaatctgggagttcctaa

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