Solanum dulcamara (climbing nightshade): 129874563
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Entry
129874563 CDS
T09577
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00040
Pentose and glucuronate interconversions
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129874563
Enzymes [BR:
sdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
129874563
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
DinB_2
Motif
Other DBs
NCBI-GeneID:
129874563
NCBI-ProteinID:
XP_055805835
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Position
11:complement(60538225..60540508)
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AA seq
445 aa
AA seq
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MGGTKLVYLSLLLFSTFLAINGHIGDFDEVWRRRAQEADEWAIKAYKPDPINVTLAFAKQ
TAEAMKELKEAKLVTNGTRRELRGGKKYNGPCLVTNPIDRCWRCQPNWADNRKRLADCAM
GFAKGTTGGKAGNIYVVTDSSDDTSNPKPGTLRYGVIQKEPLWIIFAKSMTIRLHQELIV
QSDKTIDGRGVNVHIANGAGIMLQYVKNVIIHSLRIHDIVMGSGGMIRDAVDHIGQRTQS
DGDGISIFGSSNIWVDHVSMWSCYDGLVDAVEGSTAVTISNSHFTDHNEVMLFGASDSSS
IDQRMQITVAYNHFGKRLIQRMPRCRWGFIHVVNNDYTHWNMYAIGGSQHPTIISQGNRF
IAPPDMFKKEVTKRDYSPESVWKQWSWRSQGDLFMNGAFFVESGDPDWTKKHIELFDGVA
SASGDQVTWITRFSGALNCKPGQAC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaactaagctggtatatttgtccctgttactattttccacatttttggcaata
aatggtcacattggtgattttgatgaggtgtggaggagaagagcccaggaagcagatgaa
tgggccataaaagcctataagcccgacccgatcaatgtcacccttgcatttgctaaacaa
actgcggaggccatgaaggaattaaaggaagcgaagctggtaacaaatggaacaaggagg
gaattaagaggaggcaaaaaatacaacgggccttgcttagtgaccaacccaattgatagg
tgctggagatgccaacctaattgggccgacaatcggaaaaggttagctgattgtgcaatg
ggctttgcaaaagggaccaccggcggaaaagccggcaatatctacgtcgtcacggattct
tccgacgacactagcaaccctaagccgggaaccctccgttacggtgtcattcaaaaggag
ccattgtggatcatatttgctaaaagcatgaccattaggctacaccaggagctcattgtg
caaagcgataagaccattgatggccgtggagttaacgttcacatcgcaaatggagcaggt
atcatgctccagtacgtgaagaacgtgatcatccacagtctccgcattcacgacatcgtg
atgggcagtggtgggatgatcagagacgcggtggaccacatcggacaacggacacagagc
gatggagatggtatttcaatatttggttcgtcgaatatatgggtggatcatgtgtcaatg
tggagttgttatgacggacttgttgatgctgtggagggatccactgctgttaccatatcg
aacagccatttcactgatcataatgaggtgatgctttttggtgcgagtgatagttcttca
attgatcaaaggatgcaaattactgtggcttataatcattttggaaagagattgatacag
agaatgccaaggtgcagatggggttttattcatgttgttaacaatgactacacacattgg
aatatgtatgcaattggtggtagccaacatcccactattattagccagggtaatcgtttc
attgctcctcctgacatgttcaagaaagaggtaacaaagagggactattccccagaatca
gtgtggaagcaatggtcatggagatcacaaggcgatctattcatgaatggagcattcttt
gttgaatctggagatccagattggaccaagaaacatattgaactttttgatggggttgca
tcagcctcaggggatcaagtcacttggattacaagattttcaggggcactaaattgcaag
ccaggacaagcttgttag
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