Solanum dulcamara (climbing nightshade): 129874630
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Entry
129874630 CDS
T09577
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129874630
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129874630
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129874630
Membrane trafficking [BR:
sdul04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
129874630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
ZapB
Motif
Other DBs
NCBI-GeneID:
129874630
NCBI-ProteinID:
XP_055805921
LinkDB
All DBs
Position
11:complement(43488784..43520145)
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AA seq
1001 aa
AA seq
DB search
MDSQSSRSSGRFESSPSTINNTPFLTKSISDASSSSSPHSQSLASILNNPHAGKSDGFWW
WSTSSSIPTPDFLPLSTLPKPGSDTRVLDFQSYLSSISDPYARFHDIQQHARFESLEDQD
DQNALVACLKEVPALYFKEDFELEDGATFKAACPFRTTAENLVTQEKLSQYLDVVELHLV
REISLRSNSFFEAQGQLEDLNSKIVEGCDRIRELKETIRLLDDDLVGSARKVQELNVQRS
ELIAHQDKLNLILYVNQALSTLKLLVASADCAGALDVIDDLQHLLDGDELAGLHCFRHVR
DQLAASIDSINSILSAEFMRISIHGTGNGDASSTSKFKVQATITMNGEGHEVKLDEEDSC
NLRDRLLPFVIGLLRTAKLPAVLRIYRDTLTADMKTAIKMAVEELLRVLGAQPMDSDFVA
GERAVDADGGSSSLASRLRSLSPECFVHLLKAVFLIVQAHLAQASEVKRAIEWILCHLDG
HYAADSVAAAIALGAAASETAHETDDQVNSSLQLSVQRNTAKVSSAHGIGNDGITSSTLS
RNFRADVLRENAEAVFAACDAAHGRWAKILGVRSPIHPRLRLQEFLNIYNITQEFITATE
KIGGRLGYSIRGTLQSQAKAFIDFQHESRMAKMRAILDQENWAEIDVPGEFQAIVTSLFC
SESETRELADEVSADIAPNSPKRVLNSDGSLTTEARPQKISQNAEHTDSIPLSGSTPQSN
ETNSKERGRSSTRLLFFRGVGYHMVNCGLILVKMLSECIEMNNNLPGLSPEVVHRVVEIL
KLFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFTYTIIPELKRILLLKVPEMRK
GLLNLEVDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRGLPQIAESWNRPENTDIQPSQF
VRSITKEVGLLQRVLSRTLHELDVQAIFSCRQVVIIFHSQISEAFSHLDISSPQAKKRMY
CDVQHILACIRLLPSVSKSNPPNWGKLDEFVANNFGEEVCQ
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggattctcagtcgtcccgttcttcgggaaggttcgaaagtagtccttctactatcaac
aatactccattcttgaccaaatcaatttccgatgctagcagcagcagcagcccccatagc
cagagcttagcctccattctcaacaacccacatgccggaaaatccgatgggttctggtgg
tggtccacttcatcatctatcccgacacccgacttcctacctttatcaactctacccaaa
cccggatccgatacccgggtcctcgatttccaatcctatctctcttccatatccgaccca
tatgctcgtttccacgacattcaacagcacgcgaggtttgagtcactggaagatcaagat
gaccaaaatgccctcgttgcttgcttgaaggaagtccccgcgctatactttaaagaggat
tttgagttagaggatggtgctacttttaaagctgcttgcccttttaggaccactgcggaa
aatttggttacgcaggagaagctatcacagtatttggatgtagtggaattgcacttggtt
agagagatttccttgcgatcaaattcctttttcgaggcacaaggtcagttagaggattta
aattcgaagattgttgaggggtgtgataggataagggaattgaaggagactataaggctc
ttggatgatgatttggtggggtctgctagaaaggtacaggagttgaatgttcagaggagt
gaattgattgcccaccaggacaagttgaaccttatactttatgttaatcaagctctatca
actctcaagttgcttgttgcatctgcagattgtgctggagctttagatgttatagatgat
ttacaacatttattggatggagatgaattagctggtctacattgtttccgtcatgttcgt
gaccagttagccgcttcaattgattccattaacagcattctttcagcagaatttatgcgt
atatctatacacggaactggcaatggggatgcttcaagtacatcaaaattcaaagtgcag
gcgacaattaccatgaatggagaaggccatgaagttaaattggacgaagaagactcatgt
aatttgcgagaccggctacttccttttgttattgggttacttagaactgcaaaactccct
gctgtattgagaatataccgtgacactcttacggctgatatgaaaactgccattaagatg
gcagtggaagaactgctacgggtgcttggtgcccaacctatggattcagattttgttgca
ggagaacgagcagttgatgctgatggtggaagctcatcccttgccagtagattgagaagc
ctgtcgcctgaatgttttgttcatcttttgaaggctgttttcctgatagtgcaggcacac
ttagcacaggcatctgaagttaaaagagccattgagtggattttgtgccatcttgatggc
cattatgctgctgattcagttgctgctgcaattgcacttggagcagcggcttcagaaaca
gctcatgaaaccgacgatcaggtaaattcctcgctgcaactttctgtgcaaaggaacact
gccaaggtctcttctgctcatgggattggaaatgatggtataacgtcatcgactttatcg
agaaatttcagagctgatgtattgagagagaatgcagaagccgtttttgcagcttgtgat
gctgctcatggcagatgggcaaagatccttggagtccgttctcctatccaccctagattg
aggttgcaggagtttctaaatatatataacatcactcaagaatttataacggctactgag
aagattggtggaagattgggttatagtattcgcggaacattgcaatcacaggccaaggcc
tttattgatttccaacacgaatccaggatggcaaagatgagggccattctcgaccaggaa
aattgggctgagattgatgtccctggagagtttcaggcaattgtcacatcactgttctgc
tcagaatctgagacccgtgaacttgctgatgaggtttcagctgatattgcaccaaacagc
cctaagagggtcttgaacagtgatggttcccttacgacagaagctagacctcaaaagata
tcacaaaatgcagagcacactgattctattccactttcagggagtacaccacagagcaat
gaaactaactcaaaagagcgtggaagatcttctactagactgcttttcttcagaggtgtt
gggtatcatatggttaactgcggcttgattttggtaaagatgttgtcagagtgtattgag
atgaataataatttaccgggcctatctccagaagtcgttcaccgtgttgtcgaaatcctg
aaattgttcaatacaaggacttgtcagcttgtccttggtgctggagcaatgcaggtttca
ggtttgaagtctattacttctaaacacttggccttggcaagtcaagtcatcagtttcaca
tacaccataattcccgaactcaagaggattctgctccttaaagtgcctgagatgcgcaag
ggccttctgaatctggaggttgatcgtgtagcacaggattataaggtgcaccgagatgag
atacactcaaagttggtgcagataatgagggaaaggttgctggtccacctacgtgggttg
ccacagattgctgagagttggaatagaccggaaaatactgatatacagccaagtcagttt
gttcgttctatcactaaggaagttggccttcttcaacgtgtcttatctagaaccctgcat
gagttagatgttcaagctattttcagttgcaggcaagtggttattatcttccattctcaa
atttcagaagctttttcgcacttggatattagcagtccacaagctaaaaaaagaatgtat
tgcgatgttcagcatattcttgcatgtatcagattattaccttcagttagcaaatctaat
cctcctaattgggggaaacttgatgaatttgtggcaaataattttggtgaggaagtttgt
caatag
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