KEGG   Solanum dulcamara (climbing nightshade): 129874643
Entry
129874643         CDS       T09577                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129874643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129874643
   03041 Spliceosome [BR:sdul03041]
    129874643
   03032 DNA replication proteins [BR:sdul03032]
    129874643
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     129874643
Spliceosome [BR:sdul03041]
 Complex A
  U1 snRNP components
   Sm proteins
    129874643
  U2 snRNP components
    129874643
 Complex B
  U1 snRNP components
    129874643
  U4/U6.U5 tri-snRNP components
    129874643
 Complex C
  U2 snRNP components
    129874643
DNA replication proteins [BR:sdul03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     129874643
SSDB
Motif
Pfam: LSM SM-ATX DUF6897
Other DBs
NCBI-GeneID: 129874643
NCBI-ProteinID: XP_055805941
LinkDB
Position
11:complement(53247014..53251588)
AA seq 132 aa
MSRSLGIPVKLLHEATGHIVTVEMKSGELYRGSMVECEDNWNCQLESITYTAKDGRVSQL
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGTSLGVGRGRAIAMRAKAQAAGRGA
PPGRGTVPPVRR
NT seq 399 nt   +upstreamnt  +downstreamnt
atgagtcgtagcttaggcataccggtgaagcttctacatgaagcgacagggcatatagtg
acggtagagatgaagagtggagaactttacagaggaagtatggtggagtgcgaggataac
tggaattgccaactcgagagcatcacttacacagctaaagatgggagagtgtcacaacta
gagcatgttttcattcgaggcagcaaagtcaggttcatgataattcctgatatgcttaag
aatgctcccatgttcaagcggctagaagcaagaatcaagggaaaaggcacatcacttggt
gttggtcgggggcgtgctattgctatgcgagctaaagctcaggctgctggtcgtggagca
ccacctggtcgaggtactgtgccacctgtaagaagatga

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