Solanum dulcamara (climbing nightshade): 129874697
Help
Entry
129874697 CDS
T09577
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdul03036
]
129874697
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129874697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
129874697
NCBI-ProteinID:
XP_055805996
LinkDB
All DBs
Position
11:12823796..12858292
Genome browser
AA seq
745 aa
AA seq
DB search
MKRDYYEISDDEWPEHNSFNPSRVLKLKPSVPPPPIGSFAYSNTTNQNTSKSSNFIQLLD
SSSEEIGVGNTTENLEDDDAEIDSTMNQTNSRGRRRFVVDDEEEGLNSNEEEEEEEEEEE
EIELFENEESEEDDDVVGKALQKCGKISMELKRELFGTAAAKCDSFVEVEEASSLRIVTQ
DDIDLACGEGDSDFRPILKPYQLVGVNFLLLLYRKKIGGAILADEMGLGKTIQAITYLTL
LKHLEDDPGPHLIVCPASVLENWERELKKWCPAFTVIQYHGAGRSAYSKDLSSLARTGLP
PPFNVILVCYSLFERHSAQQKDDRKILKRWRWSCVLMDEAHALKDKGSYRWKNLMSIARN
ANQRLMLTGTPLQNDLHELWSILEFMMPDLFETGDVDLKKLLNAEDKELIARIKSILGPF
ILRRLKSDVMKQLVPKIQMVRYVGMEKQQEDAYKEAIESYRAASLARVSKQPVISLNNAA
GVFSRRQISNYFLEFRKIANHPLLVRLIYTDDDVVRIARVMHPKGVFGFECTVDRVIEEL
KSYNDFSIHKLLLYYGDNNKGVLSDERVMISAKCQELAKLLPSLKLSGHRVLIFSQWTSM
LDILEWTLDVIGVTYRRLDGSTQVTERQTIVDTFNKDTSIFACLLSTRAGGQGLNLTGAD
TVIIHDMDFNPQIDRQAEDRCHRIGQNKPVTVYRLVTRNTVDENVYEIAKRKLTLDAAIL
ESGAQIENEGDAKSMGEILSSLLLG
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgactattacgagatttccgacgatgaatggccggaacacaattccttcaac
ccttctcgcgtcctcaaactcaagccttctgttccacctcctcctatcgggtccttcgca
tactccaacaccaccaatcaaaatacatcaaaatcctccaatttcatccaactgttagat
agttcctccgaagaaattggagttggaaacaccaccgagaatttggaggacgatgatgct
gaaattgactccactatgaaccagaccaacagccgtggccgccgaagatttgtggtggat
gatgaagaagaaggattgaactcaaatgaagaagaggaggaggaggaggaggaggaggag
gagattgagcttttcgagaacgaggagagtgaagaggatgatgatgttgtaggaaaggca
ttgcaaaagtgtgggaaaatatctatggagcttaagagagagctttttggtactgcagct
gcaaaatgcgattcctttgttgaagtggaggaggcttcgtcactgagaatcgtgactcag
gatgatatagacctggcatgtggagaaggagattcggattttagaccaatacttaaacct
taccagctcgttggagtcaatttcctccttttgttgtataggaagaaaatcgggggagct
atactggctgatgaaatgggtcttggtaagaccattcaggcaatcacatacttaacattg
ctgaagcatttggaagatgatcctggtcctcatttaattgtttgtcctgcctctgttttg
gagaactgggaaagagagctaaaaaagtggtgtccggcatttactgtgatccaatatcat
ggtgctggacgatcagcttactcaaaagacttgagttctctggctaggactggactgcca
cctccatttaatgttatcctagtgtgctactcgctttttgaacggcacagtgcacagcag
aaagatgaccgcaaaattctgaagcgctggcgttggagctgtgtgctaatggatgaggct
catgctttgaaggataaaggcagctataggtggaaaaacttaatgtctattgctcgtaat
gccaaccagcgattaatgctcactggcacaccactacaaaatgatttgcatgaactttgg
tcaattttggagtttatgatgcctgatctatttgaaacaggagatgttgacttgaaaaaa
ctattgaatgcagaagataaagagttaattgctcgaataaagtccattcttggacctttc
atattgagaagattaaaatcggatgtgatgaaacaactggtaccaaaaatacagatggtt
cgttacgtaggcatggagaaacaacaagaagatgcatataaagaagcgattgaaagctac
cgtgctgcatctctagctcgtgtttcaaagcaacctgtcattagtttgaataatgctgct
ggtgtcttttctagacgacaaatttccaattattttcttgaattccgcaagattgcaaac
catcctttgcttgtgaggcttatttataccgatgatgatgttgttcgaattgctagagtt
atgcatcccaaaggtgtctttggttttgaatgtacagtggacagagtaattgaagagctg
aagagctataatgacttctctatccacaaacttttactttattatggcgataataataag
ggagtgctgtcagatgaacgtgttatgatttcagctaaatgccaggaattagccaaactt
ctcccttcattgaagctttctggtcatcgagtgcttatttttagccagtggacatcaatg
cttgatatcctggagtggaccctagatgttattggtgttacatacaggcgcctggatgga
agtactcaggtgacagagagacagacaattgttgacaccttcaataaggacacttccata
tttgcatgcttactctccacaagggccggaggacagggtttaaacttgacaggagctgat
actgttatcatacatgacatggattttaatccacagatagatcggcaagctgaagatcgc
tgtcaccgtataggccaaaacaaaccagttacagtatacaggctggtgactaggaatact
gttgatgagaatgtatatgagatcgcgaagcgaaaacttacattggatgcagctatactc
gagtctggtgcccaaattgagaatgaaggtgatgcaaaatctatgggtgagatattatcg
tctcttctgcttggttag
DBGET
integrated database retrieval system
