KEGG   Solanum dulcamara (climbing nightshade): 129874727
Entry
129874727         CDS       T09577                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129874727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129874727
   03041 Spliceosome [BR:sdul03041]
    129874727
   03032 DNA replication proteins [BR:sdul03032]
    129874727
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     129874727
Spliceosome [BR:sdul03041]
 Complex A
  U1 snRNP components
   Sm proteins
    129874727
  U2 snRNP components
    129874727
 Complex B
  U1 snRNP components
    129874727
  U4/U6.U5 tri-snRNP components
    129874727
 Complex C
  U2 snRNP components
    129874727
DNA replication proteins [BR:sdul03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     129874727
SSDB
Motif
Pfam: LSM SM-ATX DUF6897
Other DBs
NCBI-GeneID: 129874727
NCBI-ProteinID: XP_055806040
LinkDB
Position
11:complement(34657259..34661543)
AA seq 132 aa
MSRSLGIPVKLLHEATGHIVTVEMKSGELYRGSMVECEDNWNCQLETITYTAKDGRVSQL
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSSLGVGRGRAMAMRAKAQAAGRGA
APGRGVVPPVRR
NT seq 399 nt   +upstreamnt  +downstreamnt
atgagtcggagcttaggcataccggtgaaacttcttcacgaggcgacagggcatatagtg
actgtagagatgaaaagcggtgagctttacagaggaagtatggtcgagtgcgaggacaac
tggaattgccagctcgaaaccatcacttacactgctaaagatggaagggtgtcacaactg
gaacatgtttttattagaggcagtaaagtcaggttcatgataattccagatatgcttaag
aatgctcccatgttcaagcgtctagaagctagaattaagggcaaaggttcatcacttggt
gttggacggggacgtgctatggcaatgcgagctaaagctcaggcagcaggtcgtggagca
gcacctggtcggggtgttgtacctcctgtaagaagatga

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