Solanum dulcamara (climbing nightshade): 129874787
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Entry
129874787 CDS
T09577
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129874787
Spliceosome [BR:
sdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129874787
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
129874787
NCBI-ProteinID:
XP_055806119
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All DBs
Position
11:60048980..60066080
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AA seq
472 aa
AA seq
DB search
MSTSGQQQFRYTQTPSKVLHLRNLPWDCSDEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRNEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLL
PEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLLQPVVGPDGKKKEP
ESNVLFASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDLTIAAAAKD
ALEGHCIYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQQASAVHAAPAVW
HNPQSGPAQPSAGYAATGAVPGQAPPTSQLSSWNPNLQGGGSTFPSAPTGYPGHSYAPPV
PAYATAVHPPGSSQQTNHIATGSRPFSVSQPFHPSTMPPGGVPPPGHAPYHG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatccgggcaacagcagttccggtacacgcagacaccgtcgaaagttcttcac
ctccggaatctgccatgggattgcagcgatgaagagctagtagagctttgcaagcccttt
ggtaaaattgtcaacaccaagtgcaacgtcggggccaatcgcaaccaagcgtttgtcgaa
tttgcagaccttaatcaggcaatcaatatggtttcatattatgcttcatcttcagagcct
gctcaagttcgtggcaagacggtgtacattcagtattctaacaggaatgaaattgtcaat
aataagagtcccggagatgttccaggaaatgttttgctggtgactatcgagggtgttgaa
gctggtgatgtcagtatcgatgtcattcatttggtattttcagcctttggttttgttcaa
aagatcgctacttttgaaaaggctgcaggttttcaggcattgattcaatttagtgatgtt
gggacagcgtctgctgctagagaggcattggatgggagaagtataccaaagtacctgctt
ccagaacatgttaatcattgtcatttgcgcatctcatattcagcgcacacagatcttaat
atcaagtttcaatctcatcgaagcagggactacacaaacccttatctcccagtaaatcct
actgcaatggaggggcttcttcagcctgttgtaggtccagatggaaagaaaaaggaaccc
gagagtaatgtgctgtttgcctctatagaaaatatgcagtatgctgttaccgttgatgtc
cttcacacggtattctctgcatttggtaccgttcagaagatcgctatatttgagaagaat
ggtcaaacccaggcattaattcaatatcctgatttaacaattgctgctgctgcaaaggac
gctttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctgaatgtacaggcatacagtgacaaaagtagagattacacagttcca
gaatcaagtttgctcgcgatgcaacaagcatctgcagtccatgctgcgccagctgtttgg
cataaccctcagtccggtccagcacagccatcagctggctatgccgctactggtgctgtt
cctggccaagcaccacctacatcccaattatcctcatggaatccaaatttacagggtgga
ggatcaacctttccgtcggctcctactggatatccaggtcattcatatgctccgcctgtt
cctgcttatgcaaccgcagtacatcctcctggatcgtcacaacagaccaatcacattgct
actggtagtcgaccttttagtgtaagtcagccttttcatccatcaaccatgccgcctggg
ggtgttccacctccgggtcatgcaccttatcatggttaa
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