KEGG   Solanum dulcamara (climbing nightshade): 129874854
Entry
129874854         CDS       T09577                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129874854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdul04121]
    129874854
Enzymes [BR:sdul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129874854
Ubiquitin system [BR:sdul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    129874854
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX RING_XB3-XBAT31 zf-RING_2 zf-C3HC4_4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 Prok-RING_4 YdjO zf-NOSIP zf-rbx1 zf-ANAPC11 Rtf2 Baculo_IE-1 FYVE
Other DBs
NCBI-GeneID: 129874854
NCBI-ProteinID: XP_055806205
LinkDB
Position
11:47972653..47974389
AA seq 231 aa
MAFEQYYSNEWKSIPTSESSDSEKTSACFDCNICLDFARDPVVTLCGHLYCWPCIYKWIH
FQSDSLSSDKHPQCPVCKAKISQTDLVPLYGRGETLPKSEPENKLTLKVPPRPPAFGPLS
LSNSFNPSQQPPHPNAYDSYASYLNSSSPPSFNLGRNTTVGVFDPVVGMFGEMVYARVFG
NSESLYTYPNSYHLVANSSPRLRRREMLADKSLNRISLFLFYCFLLCLLLF
NT seq 696 nt   +upstreamnt  +downstreamnt
atggccttcgagcagtattattcaaatgagtggaaatcgattcctacttcagaatcatca
gactcagagaagacttctgcctgttttgattgcaacatctgcttggactttgcccgtgat
ccggttgttacactttgtggccatctctattgttggccctgcatttacaagtggattcac
ttccagagcgactctttgtcttcggataaacaccctcaatgtccagtttgcaaggctaaa
atctcccaaacagatttagtccctctttatgggcgtggggaaacactgcctaaatctgag
cctgaaaacaagctcactctaaaagtgcctcctaggccacctgctttcggtccattatcc
ttgtcaaattcctttaatccttctcagcaaccgccacatcctaatgcctatgattcctat
gccagttacctcaacagttcatcaccgccttcattcaatcttggacgcaatacaacagtg
ggagtctttgatccagttgttggtatgtttggagagatggtttacgctagggtattcggg
aactcagagagtttatacacatatcctaactcctatcatctagtggcaaatagtagtcca
agattgagaagaagggaaatgctggctgacaagtctttgaacagaatttccctttttctc
ttctattgttttcttctttgcctactgttattctag

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