Solanum dulcamara (climbing nightshade): 129874899
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Entry
129874899 CDS
T09577
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129874899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129874899
03036 Chromosome and associated proteins [BR:
sdul03036
]
129874899
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129874899
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129874899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
129874899
NCBI-ProteinID:
XP_055806259
LinkDB
All DBs
Position
11:complement(61935145..61940377)
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AA seq
611 aa
AA seq
DB search
MQTYQDKSHDELRFEDYQLGAKGTLAFNAAMNATSSQTQSISPGSSTLQTFGKKYDVNSV
AKESLMRDANVSDSSILGYPRAPAFGVPRNSHFATPRFDSYSFGQPAVSISGSKDQICKL
GKESTAPLLKSSGFVKSAFGVNQKGSRTASYIATPDLDCTIPDGAKIQSICGMQTYKDKS
QEELRFEDYQLGDKGQKCGSSCGISGTQGFGIIDNTRPFISPVFNQATVDQLFYSLFPRT
FVGERAEVDSLSDEISTATASXPISHIFPPNTSLLNSRGTGSRVESTASDVSFSPWIHSR
PFAPLNPSSNSSTTSTFSPLRNPWSLSTSVPLSPCSVSPSTYPLLAKSSAHVFGRKNSFS
PTPVLTTGGAPQSTLCLHCLKQSQPTPPGLCNVSSTPLAVSQNTPLFFGPLXPEMTPKVG
AILPTTNASHPSTKGASCSEIGQGICQPSINDQQSYFPRIMEVNASPIMPPAEIQPSVQI
SVEHPNLATSIQYGISGLPVSNNPAPVRRRSALIIRNSSLSQHRLPPQKYKPTSDKPKVP
FFMDNENISGVLRTEVIIIPRENLRDWVRPTSEFPLGADSSMNRMHDRDKGDKPNLEAEE
MHLVNCGDKPN
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcagacttatcaagataaaagccatgacgagttgaggtttgaggactaccagttaggt
gctaaagggacattagcctttaatgcagcaatgaatgctacatctagtcaaacacaaagc
atatctccgggctcatccactttacaaacatttggaaagaaatatgacgttaacagcgtg
gccaaggaatctctgatgagggatgccaatgtctcagactcttccattcttggatatcca
agagctcctgcatttggtgttccaagaaactcacactttgccaccccaagatttgattct
tattccttcggccaaccagcagtatccatatcagggagcaaagatcaaatttgcaaacta
ggaaaagaaagtacagcacctttgctcaagagctctggttttgtaaagtccgcatttggt
gttaatcagaaaggaagcagaacagcatcatacattgcaactccggatttagattgcaca
atacctgatggtgcaaaaattcaatccatttgtggaatgcagacttataaagataaaagc
caggaggagttgaggtttgaggactaccagttaggtgataaaggtcagaaatgtggttct
tcatgtggtatttccggtacacagggatttggtatcatcgacaacacacggcctttcata
tcaccagtatttaaccaagcaactgttgatcaacttttttattccctttttccacgtaca
tttgtaggggaaagagcagaggttgactctctatcagatgaaatttctacagcaactgca
tctnaccccatttcccatatatttccccccaatacatcattgttaaactctcgtggcact
ggaagtagagtggaatctactgcctcagatgtttctttttctccgtggatccattcaagg
ccgtttgcacctttaaatccatcttccaattcttccactacctccaccttttccccatta
aggaatccatggtctttatcaacatctgtccctctatctccatgttcagtctcaccttcc
acatatcctttgttagcaaaatcatctgcccatgtttttggtcgaaagaactctttttct
cccactcctgtcttaactacaggaggcgctccacaatccacattatgcttgcattgccta
aagcagtctcagcctactccaccaggactttgtaatgtttcaagcactccacttgctgtg
agtcaaaatactcctctgttctttggtcctctgtagccagaaatgactcctaaagttgga
gcaatacttccaacaaccaacgcttctcacccatcaacaaaaggtgctagttgctcagaa
attggacaaggaatttgtcagccaagtatcaatgaccaacagtcttactttccgagaatc
atggaagtgaatgcgtcaccaattatgcctcctgctgaaatacaaccttcagtccaaatc
tcggttgagcacccgaatttggcaacatccatccagtatggaatttctggtttacctgtt
tctaacaaccctgctccggtcagacgaagatctgcgttgataattcggaattcatctcta
agtcagcataggttgccacctcagaaatacaaacctacaagtgataaaccaaaggtaccc
tttttcatggataacgaaaacatttctggtgtactaaggacagaagtcatcatcattcca
agggaaaatctaagggactgggttcgtcctacctcagaatttccactgggggctgattca
tctatgaacaggatgcatgacagagacaaaggtgataagcccaatttagaggctgaagag
atgcatcttgttaattgtggtgataagcccaactga
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