Solanum dulcamara (climbing nightshade): 129875205
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Entry
129875205 CDS
T09577
Name
(RefSeq) ATP-dependent DNA helicase DDM1-like
KO
K19001
ATP-dependent DNA helicase
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdul03036
]
129875205
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129875205
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Motif
Other DBs
NCBI-GeneID:
129875205
NCBI-ProteinID:
XP_055806627
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Position
11:complement(54311402..54319098)
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AA seq
763 aa
AA seq
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MVADEGVKDKTVVDSPVSVLEDDDTCKEELAVKLEEEVFFDPENGDATYIPGSMAKEEEM
LIRARAKEEEEQLNKLKEAPILNDTQFTKLDELLTQTQLYSEFLLEKMDNITTTNVIEDE
EKSSKENKKGRGSKRKATTSYNNNKAKRAVAAMLTRSKEDVPIEDATLTEEERFEKEQAE
LVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLDGP
YLIIAPLSTLSNWLNEMERFVPSINAIIYHGDKKQRDEIRMKHMPRTIGPKFPFVITSYE
IAMSDARKFLRHYSWKYLVVDEGHRLKNSKCKLFKELKLLPIENKLLLTGTPLQNNLAEL
WSLLNFILPDIFSSHDEFESWFDLSGKFSNESEKEEMEERRRAQVVAKLHAILRPFLLRR
LKVDVEQMLPRKKEIILYATLTDYQKKFQEHLINRTLEGYLIENVSTGNGFKGRLNNLMI
QLRKNCNHPDLLESIFNGSNFFPPVEQIVEQCGKFRLLDRLLSKLFAREHKVLIFSQWTR
VLDIMDYYFSERGFDVCRIDGSVKLDERKRQIKEFNDVCSKYRIFLLSTRAGGLGINLTA
ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTALSVEGRILKRAFSKLKLEHV
VIGKGQFKQERSKPSMDVKDVTEEEELLSLLKDQDSEEDKLVQTDVSDEDLERILDRSDL
LIHPPSGEDGNTESCVNVLPLKGPGWEVVIPTATGGMLSTLNS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgatgaaggagtgaaggacaagacagttgtggactctcctgtttctgtcctc
gaagatgatgatacctgcaaagaggagttggctgtcaagttggaggaagaagtatttttt
gacccagaaaatggggatgccacttatatacctggaagcatggccaaggaggaagaaatg
ttgataagagcacgggcaaaggaggaagaggaacagctaaataaactgaaggaagcgccc
atcttgaatgacactcaatttaccaagctggatgaacttcttacccagacacagctttac
tctgagtttctactggagaagatggataacatcacaacaacgaatgtgatagaagatgaa
gagaaaagcagtaaagaaaacaagaaaggccgtggctcaaaacggaaggcaaccacaagc
tacaacaataacaaagccaaaagagctgttgctgccatgcttactagatctaaagaagat
gttcctatagaagatgcaacccttacagaggaagagagattcgagaaagagcaggcagaa
cttgtgcccttgctgactggtgggaagttgaaatcttatcaactgaaaggtgtcaagtgg
ttgatttcattatggcaaaatggattgaatggtattctagcagatcaaatgggacttgga
aagacaattcaaacaatagcttttcttgctcatttgaaggggaatgggttggatggtccc
tatttgatcattgctcccctgtctacactttcaaattggttgaatgagatggaaaggttt
gtgccctcaatcaatgcaatcatctatcacggtgacaagaaacagagggatgagataagg
atgaagcacatgcctaggaccataggtcccaaatttccctttgtaattacgtcttatgaa
attgcaatgagtgacgctaggaaattcctaaggcactacagttggaaatatcttgtggtg
gatgagggacataggctaaagaactcaaaatgcaaactgttcaaagaattgaagctgttg
ccgattgaaaacaagcttctattaactggaacccctctgcagaataacttagctgagctg
tggtccttgttaaacttcattttaccggatatattctcatcccatgatgaatttgagtca
tggtttgatctgtctggcaagttcagcaatgaatctgaaaaagaagagatggaagaaaga
aggagagcgcaagtggtggcaaaactccatgcaatattacgcccttttctcctaaggagg
ctgaaagtggatgttgagcaaatgcttcctcgtaagaaggagataattttgtatgccacc
ctgactgattaccagaaaaagttccaggaacacctaattaataggacgctggagggctat
ttgattgagaatgtgtccactgggaatggatttaaaggaaggcttaataacttaatgatt
caacttcgcaagaattgcaaccatcctgacctcttggagtctatcttcaacggctctaat
ttttttccacctgtggaacaaatagttgagcaatgtggcaagtttcgcttgctggacagg
ctgttatcaaagctttttgctcgcgaacacaaggttttgatattctctcagtggactaga
gtactagacataatggactattattttagtgaaaggggatttgatgtttgtagaattgat
ggcagcgtgaaattggatgaaagaaaaagacagatcaaggagttcaatgatgtttgcagc
aagtacaggatatttcttcttagcactagagctggtggccttggtatcaatctcactgct
gctgatacctgtattttatatgacagtgactggaatcctcaaatggatctacaagcaatg
gatcggtgtcatagaattggtcagactaaacctgttcatgtttaccggctttcaacagct
ttgtctgtggagggtcgaatcctcaaaagagcttttagcaagttgaagcttgagcatgtg
gttatcggaaaaggacaattcaagcaggaaaggagtaaaccttccatggatgttaaggat
gttacagaggaggaggagttgttgtctctcttgaaagatcaagatagtgaggaggacaag
ttggtgcagacagatgtcagtgatgaagatctggagaggattttagaccgtagtgatcta
cttatccatcctccttcaggagaagatggaaacactgaatcgtgtgttaatgtcctgcct
ctcaaaggacctggttgggaagtagttattccaactgcaactggaggaatgctttctacc
ctcaacagctga
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