Solanum dulcamara (climbing nightshade): 129875256
Help
Entry
129875256 CDS
T09577
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129875256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
LRR_R13L1-DRL21
AIG2_2
Motif
Other DBs
NCBI-GeneID:
129875256
NCBI-ProteinID:
XP_055806684
LinkDB
All DBs
Position
11:complement(56958206..56960710)
Genome browser
AA seq
599 aa
AA seq
DB search
MAINSGLPSPLGPLACEKDVKVLQFIEDMTKNTDPVQENVLAEILTRNANTEYLQRFNVV
GAIDRETFKSKVPVVTYEDLKPDIDRIANGDRSPIFSSHPISEFLTSSGTSAGERKLMPT
IADELERRQKLYNLLQPVMNLYVPGLDKGKGLYFLFIKAETKTPGGLVARPVLTSYYKSE
QFKTRPYDPYNVYTSPNEAILCVDSFQSMYSQMLCGLLMREEVLRVGAVFASGLLRAIRF
LQLNWKQLSQDIASGTLYSRVSDPSIRNCISEILKPNPELAELIVKECEGENWEGIITRI
WPNTKYLDVIVTGAMAQYIPTLDYYSGSLPKVCTMYASSECYFGLNLKPMCKPSDVCYTI
MPNMGYFEFIPHDSVTPVQISRDSPPHLVDLADVEIGKEYELVITTYAGLCRYRVGDILQ
VTGFYNSAPQFKFVRRKNVLLSIDADKTDESELQTAIENATTLLRPYDTNLVEYTSFADT
NTIPGHYVIYWELLVKDPANPPSQQVLNQCCLAMEESLNSVYRQCRVADNSIGPLEIRVV
KNGTFEELMDYAISRGASINQYKAPRCVNFTPIVELLDSRVISVHFSPTAPHWTPERRR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggctattaattctggtcttccatctcctcttggtcctctggcatgtgaaaaagatgtc
aaagtccttcaatttatagaagacatgacgaaaaatactgatccagtacaagagaatgta
ttggctgaaatactaactcgaaatgccaatactgagtacctccaaagattcaacgttgtt
ggtgctattgatcgcgaaacgttcaagtctaaggtccccgttgtcacatacgaggatctt
aaacctgatattgatcgtattgctaatggtgatcgttctccaatcttctcatctcaccct
atctccgaattccttaccagttcggggacgtctgccggagagagaaaactgatgcccacg
attgcggatgagctagaacgcagacagaaactttacaaccttctccagcctgtgatgaat
ctgtatgtgcctggtctggacaaggggaagggattgtactttctgtttatcaaggcagaa
accaagacgccgggtggcctcgttgcacgtccagtcctaacaagttactacaagagtgaa
caattcaagacaaggccatacgatccttacaatgtttatacaagccccaacgaagccatt
ctctgtgtcgattctttccaaagcatgtattctcaaatgctttgtggccttctcatgaga
gaagaagtcctacgagttggcgctgtttttgcctctggcttactccgtgccatccgtttt
cttcaacttaactggaagcaattgtctcaggatatcgcgtctggaactctttactctaga
gtttcagacccgtctatcagaaattgcatttccgaaatactcaaaccaaatcctgaactt
gctgagcttattgttaaggaatgtgaaggcgaaaattgggaaggaatcattactagaatt
tggccaaacacaaagtaccttgatgtgatagtcacaggtgcaatggctcaatatatacct
actttggattattatagtgggagtctacctaaggtgtgtacaatgtacgcatcatccgaa
tgttattttggactaaatttaaaaccaatgtgtaagccttctgatgtttgttacaccatc
atgccaaatatgggttactttgaattcatccctcatgactcggtcaccccggttcaaatc
tctcgtgattcacccccacatctcgtggaccttgctgacgtggaaatcggaaaagaatac
gagctcgtgatcacaacttatgccggactatgccgttaccgagttggtgacatacttcaa
gtcaccggtttttacaactcggcgcctcagttcaaattcgtcaggcgaaaaaacgtgctg
ttgagcattgacgctgataaaaccgatgagtccgaattacaaactgcgattgaaaatgcg
acaacactgttgcgcccatatgatactaatttggttgagtacacaagttttgctgatact
aatacaattccggggcattacgttatttactgggagttacttgtaaaggacccggcaaac
ccgccgagtcaacaagtgttgaatcagtgctgcctcgctatggaagaatcgttgaactcg
gtgtacaggcagtgtcgcgtggcggataattcaatcgggccactggagattagagttgtg
aaaaatggtacatttgaggagctgatggattatgcaatttcgagaggtgcatccattaat
cagtataaggcaccaaggtgtgtcaattttactcctattgtggaacttttggactccagg
gtgatttcggtgcatttcagtccaactgctcctcactggaccccagaacgacgacgttga
DBGET
integrated database retrieval system
