Solanum dulcamara (climbing nightshade): 129875498
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Entry
129875498 CDS
T09577
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
129875498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129875498
Membrane trafficking [BR:
sdul04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
129875498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
HEAT
WD40_WDHD1_1st
Beta-prop_EML_2
HEAT_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Nucleoporin_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
129875498
NCBI-ProteinID:
XP_055806746
LinkDB
All DBs
Position
12:complement(11330940..11373917)
Genome browser
AA seq
1346 aa
AA seq
DB search
MALGDLTTSQSLAVVEDAADHEDDGRINNSTYGAVVVADNVTMMKTKETSMAYVPQFILF
RELRHDEFEAYVPSGPANTGLVSKWRVKDRMKTGCVALVLCLNISVDPPDAIRISPCARM
QCWIDPLSMPPQRALETIGRTLHQQYERWQPKARCKISLDPTVDEIKKLCTTCRKYAKSE
RVLFHYNGHGVPKPSPKDEIWLFNKSYTQYIPLPISDLDSWLKTPSIYVFDCSAAGMIVN
AFMQLQDLTASTSGPSTRDCILLAACEAHETLPQSAEFPADVFTSCLTTPIKMALRWFCT
RSLFCESFDYALIDRIPGRQTDRKTPLGELNWIFTAVTDTIAWNVLPRDLFQRLFRQDLL
VASLFRNFLLAERIMRSANCSPISYPMLPPTHQHYLWDAWDMAAEICLLQLPTLLDDPSV
EFQPSSFFTDQLTAFELWLDHGSENKKPPVQLPIVLQVLLSQSHRFRALVLLGRFLDMGL
WAVDLALSVGIFPYVLKLLQSTTPELRQILVFIWTKILALDKSCQVDLVKDGGHAYFIRF
LDSIEAYPEQRAMAAFVLAVITDGHRRGQEACIEMGLINVCLKHLQGSSYNDIQTEPLFL
QWLCLCLGKLWEDFTEAQVLGMQADAPAIFVPLLSQAQPEVRAASIFALGTLLDVGFDTS
KDEVGEDEDYDDEEKVREEVIMKSLLSVASDASPLVRAEVAVALARFAFGHKGHLKSVAA
AYLKSQSNSMPSSLPSSAVKSSGSGYTTPTCYVPHGSVVPSPNAPLLRVGGDSQSISHDG
GVSTSSPVATPGFMHGSPLSDSSSHYSDSGRLGDAVSNGVVNHTRPRPLDNSLYTKCVQA
MCALAKDPSPRIAGLGCRVLSIIGIDQVFAKSVKSTIESTVSPGPSSAGLNRSSSWFDMS
GGGRLPVSFRTPPVSLPRSSFLTGMRRVYSLDFRHHLRNSQDSGLTDPLLDSGGSSRASE
HSFLPQSTIYNWSCGHFSKPLLTVADDNEEIIARREEKEKLALDLITKCQHCLVNRLHNQ
IASWDTKFESGTRTALLQPFSTVVIASDESERIRVWNYKEATLLNSFDNHGYPDKGISKI
CLVNELDESLLLVASSDGNIRIWKEYTARGQQKLVSAFSSIQGLRPGSRSVNAVVDWQQH
SGCMFVSGEISFIMAWDLDKEQLVNTTPTYSDCSISALSASEVHVGQFGAGFVDGSVKLF
DIRMPEMLVCSTRPHPKVERVVGVGFQPGLQPAKVVSASQAGDIQFLDMRNLKEAYLTID
AHMGSLTSLAVHRHAPLVASGSSKKLIKVFNLEGEQLGIIRYLSTFMAQKIGSVRYLTFH
PYQVLLAAGAADACVSIYADEVSPPR
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggtgatttgacaacttctcagtcattagctgttgtggaggacgctgcggat
catgaagatgatggtaggattaacaatagtacctatggtgctgttgttgtggctgacaat
gtgacgatgatgaagacaaaagagacaagtatggcttatgtgccgcaatttatattgttt
cgtgagctccggcatgatgagtttgaggcgtatgttccttctggaccggctaatactggt
ttggtctctaagtggcgggttaaggaccggatgaagacgggatgtgttgcccttgttttg
tgtttgaatatcagcgttgatccacctgatgcaataaggatatctccttgtgctcgaatg
cagtgttggattgatccgctttctatgccacctcaaagagcccttgaaacaattgggaga
acattgcaccaacaatatgagaggtggcaacctaaggcacgctgcaagatctccttggat
cctactgtcgatgaaattaagaaactttgcacaacttgtcgaaagtatgccaagtccgaa
cgagttcttttccattacaatggacatggtgtaccaaaaccatcacccaaggatgaaatt
tggctatttaataagagttatacgcagtatatcccattgcctatcagtgacctggactct
tggttaaagacaccctcaatctatgtgtttgactgctcagccgctgggatgatcgttaat
gcctttatgcagctccaagacttaactgcctctacctccggaccttctacaagagattgt
attctgcttgctgcctgtgaagcacatgagacacttcctcagagtgctgaatttcctgct
gatgttttcacttcctgcctcactacgccaatcaaaatggcattgagatggttttgcacg
cgatcgttattttgtgagtcatttgattatgctctgatagatagaattccgggccgccaa
acagatcggaagacacctcttggtgaattgaattggattttcactgcagtaactgataca
attgcctggaatgttctaccacgtgatctatttcagagattgttcaggcaagacctatta
gttgctagtttgttcagaaattttttacttgctgaaagaatcatgcgatctgcaaattgt
tcaccaatttcatacccaatgctaccacctactcatcagcactacttgtgggatgcttgg
gacatggcagcagaaatctgccttttgcagcttccaactttgcttgatgatccgagtgtg
gaatttcagcctagctcattcttcactgaccagttgacagcttttgagctttggcttgac
catggatcagagaataaaaaaccaccggtgcagttgcccattgtgctgcaggtgttactt
agtcaatcccaccggtttcgagcactggttcttctcggaagatttcttgatatgggactt
tgggctgtagatctggccttgtctgttggaatatttccttatgttctaaagcttttgcaa
tccaccactccggagcttaggcaaattcttgtcttcatttggacgaagatccttgccctt
gataagtcttgccaggttgaccttgtaaaggatggtggacatgcatatttcattagattt
cttgacagcattgaggcttatccagagcaaagggcaatggctgcatttgtcttggcagta
attactgatggtcacagacggggtcaggaggcgtgtattgaaatggggcttattaatgtc
tgcttgaagcatcttcagggatcatcttataatgatatccaaactgaaccactgtttctt
caatggctgtgcctttgtctgggaaaactctgggaggatttcacagaggcacaagtacta
ggtatgcaggcagatgcaccagcaatatttgtgcctctactttctcaagcacagcctgag
gtacgagctgcatctatatttgcactaggtactttacttgatgttgggtttgatacatcc
aaggatgaggttggagaggatgaagactacgatgatgaggaaaaagttagggaagaagtc
ataatgaagagccttttaagtgttgcttctgatgcaagccctttggtacgagctgaggtt
gctgttgccttggcacgttttgcctttgggcataaggggcacctgaagtcggttgcagct
gcatatttgaagagtcagtctaattccatgcccagttccttgccttcttctgcggtcaag
agttcaggtagtggctatacgactccaacttgttatgttccacatggaagtgtagttcca
tctcctaatgctcctttattgagagtgggaggtgacagtcagtctatctcccacgatggt
ggagtctcgactagcagccctgttgcaacacctggcttcatgcatggctctcctttgtct
gatagttcttctcattattctgattctggaagactgggtgatgctgttagcaatggtgtt
gttaatcatacaagacccaggccacttgacaattcactctatactaagtgtgtgcaggcg
atgtgtgccctggcaaaggatccatcacctcgcattgcaggtcttggctgtagagtgctt
tcgattattgggattgaccaagtgtttgccaagtcagtcaagtcaactattgaatccaca
gtatctcctggtcctagttctgctggattgaatcgatcatcttcttggtttgacatgagt
ggaggtgggcgtttacctgtgtcttttaggactcctcctgttagtctcccccggtccagt
ttcctaacgggaatgcgaagagtttattctttagacttcaggcatcacctaaggaactct
caagactcagggttaactgatcccctcttggattctggtggatcttctagagcttcagaa
cacagttttcttccacagtcaaccatttacaattggagttgtggtcacttctcaaagcca
cttcttactgtagctgatgataatgaagagatcattgctaggagagaagagaaggagaag
ttagctcttgacctcatcaccaaatgccagcactgtttggtgaacagactgcataatcaa
attgccagttgggatacaaagtttgagagtggtaccagaactgctttgctgcagcccttc
tcaacagttgtgattgcttcagatgagagtgaacggatcagggtttggaattacaaggag
gctacccttcttaacagcttcgacaatcatggttaccctgataaaggaatttcaaagatt
tgcctcgtgaatgagcttgatgagagcttgctccttgttgcttcaagcgatggcaacata
cggatttggaaagaatatactgcaagaggtcaacagaaactagtttctgcattctcttca
attcaaggtctcagacctggttcgcgcagtgtgaatgctgttgtggattggcagcagcat
tctggatgcatgtttgtatcaggtgagatttcttttatcatggcttgggatcttgacaaa
gagcagcttgtaaatactactccgacatactcggattgcagcatctcagcattatctgct
tctgaagttcacgtgggtcaatttggtgctggcttcgtggatggatctgtcaaactattt
gatattcgaatgccagaaatgcttgtttgttcaacacgacctcatcccaaagtggaaaga
gttgttggggttggctttcaacctggacttcaaccagcaaaggttgtcagtgcatctcag
gctggtgatattcagttccttgatatgagaaatctcaaggaggcttacttgaccattgat
gctcacatgggatcacttacatctctagcggtacatcgtcatgcaccccttgtagcaagt
ggttcatcaaagaaacttatcaaagtgttcaacctggagggtgagcagttaggcatcatt
agatatttgtccaccttcatggctcagaagataggatctgtaagatatcttaccttccat
ccctatcaagtgctgcttgctgctggtgcagcagatgcttgtgtttctatctatgctgat
gaggtctccccaccaagataa
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