Solanum dulcamara (climbing nightshade): 129875524
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Entry
129875524 CDS
T09577
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129875524
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129875524
Membrane trafficking [BR:
sdul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
129875524
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129875524
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
129875524
NCBI-ProteinID:
XP_055806794
LinkDB
All DBs
Position
12:complement(4248045..4256489)
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AA seq
948 aa
AA seq
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MEKSCSLLIHFDKGTPALANEIKEALEGNDVPAKIDAMKKAVMLLLNGETLPQLFITIIR
YVLPSEDHTIQKLLLLYLEIIEKTDSKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNEVDIIEPLIPSIMSNLEHRHPYVRRNAILAVMAVYKLPQGEQLLADAPEKIENVLT
TEQDPSAKRNAFLMLFQCAQERAINYLLTHVDRVSDWGDLLQMVVLDLVRKVCRTNKGEK
GKYIKIIISLLNAPSAAVVYECAGTLVSLSSAPTAVRAAANTYCQLLQSQSDNNVKLIVL
DRLNELKSSHREIMVDMIMDVLRALSSPNLDIRRKTLDIVLELITPRNINEVVLTLKKEV
MKTQSGELEKNGEYRQMLIQAIHSCAVKFPEVASTVVHLLMDFLGDNNVASAIDVVVFVR
EIIETNPKLRVSIVTRLLDTFYQIRAARVCSCALWIIGEYCISLSEVESGIATIKQCLGD
LPFYSASEEGEANDSSKKSQQINSTTVSSRRPAVLADGTYATQSAASETAFSPPTVVQGS
LTAGNLRSLLLTGDFFLGAVVACTLTKLILRLEEVQPSKVEVNKATTDALLIIVSMIQLG
QSSALPHPIDNDSYDRMVLCVRLLCNTGNEVRKIWLNSCHESFVKMLSDKQMRETEEIKA
KAQISHSQPDDLIDFYHLKSRRGMSQLELEDAVQDDLKRATGEFVKDETDANKLNRVLQL
TGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAP
ESSKQIKANIKVSSTETGVIFGNIVYETSNVFDRMVVVLNDIHIDIMDYISPAVCSDAAF
RTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTALSALEGECGFLAANLYAKSV
FGEDALVNVSIEKQADSKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcctgttctttgctaatacactttgataagggcactccagctcttgccaat
gagatcaaggaagcccttgaagggaacgacgttcctgccaagattgatgccatgaagaaa
gctgtcatgcttttgttgaatggtgaaaccctaccccaactgtttattactattattaga
tatgtcttgccctctgaagatcacacgattcaaaagctgctgcttctatatttggagatt
atcgagaagaccgattctaaggggcgtgtgcttcctgaaatgatcctaatttgtcagaac
ttgaggaataatttacagcatcctaatgagtatattcgtggagttactttgagattcctt
tgccggctaaatgaggttgatataattgaacctctgattccatctattatgagcaacttg
gagcaccggcatccgtatgttcgccggaatgcaattcttgctgtgatggctgtttacaag
cttccacagggagagcagctcctggcagatgcaccagaaaagattgagaacgttcttacc
acggagcaggatccatcagctaaaaggaatgcatttctgatgcttttccaatgtgctcag
gaacgtgctatcaattacctcttgacccatgttgatagagtatctgattggggcgattta
cttcaaatggtcgtcttggatttggtccgaaaagtttgcaggacaaacaaaggggagaaa
gggaagtacatcaagataattatatcactgctcaatgccccttctgctgctgttgtctat
gaatgtgctggaactcttgtttctttgtcttctgccccaactgctgtaagagctgcagcc
aatacctactgtcaactgctacaatctcagagtgacaacaatgtgaagcttatcgtgctt
gatagactgaatgaattgaaatcttctcatagggaaatcatggttgatatgataatggat
gtcctcagagcgctctctagccccaatcttgacatcaggagaaaaacacttgacattgtt
cttgagttgatcaccccccggaatatcaatgaggttgttctcacgcttaagaaagaagtt
atgaaaacccagagcggtgaacttgagaaaaacggtgagtaccgtcaaatgcttatccaa
gccattcattcatgtgctgtgaagtttccggaggttgcaagcacagtagtccatctgttg
atggacttcttgggagataacaatgtcgcttctgcaattgatgtggttgtttttgtccgg
gagattattgaaacaaatccaaagttaagggtttccattgttacaaggctactggatact
ttctaccaaattcgagctgcacgcgtttgttcatgtgccctttggattattggagagtat
tgtatatctctttctgaagttgagagtggcattgcaactatcaagcagtgccttggagac
ctaccattttattcagcttctgaggaaggcgaagctaatgattcttcaaaaaagtctcag
caaataaactccactaccgtttcatctagaagacctgctgtccttgctgatgggacatac
gctactcaaagtgctgcctctgaaactgctttttcacccccgacagtagttcaaggatct
ttgaccgctggaaatcttagatccctcctgctaactggtgatttcttccttggggcagtt
gttgcttgcaccctgactaagctcattttgagattggaagaagttcaaccatccaaagtt
gaagtgaacaaagcaacaactgatgcattactgataattgtctcaatgatacagctaggg
cagtcttcagctcttccacacccaattgataacgattcctatgataggatggttctgtgt
gtaagattgctatgcaacactggaaacgaggtcaggaagatctggttgaactcttgccat
gagagttttgttaaaatgctttctgataagcagatgcgagagacagaagagatcaaagca
aaggctcaaatttctcattctcagcctgatgacctcattgatttctaccatttgaagagt
aggaggggcatgagtcagctggagttggaagatgcggtccaagatgatttgaagcgtgcc
actggagaatttgtcaaagatgagaccgatgctaataaactaaaccgggttctgcaacta
acaggatttagcgaccctgtttatgctgaagcatatgtgacagttcatcattatgatatt
gtcctggatgtgacagttattaatagaactaaagagaccctccagaatttatgtttggaa
ttggcaactatgggtgatcttaaacttgttgagcgtccgcagaattatactctggctcct
gagtcgagcaaacagataaaagcaaacatcaaggtgtcctcaactgagactggtgtcatt
tttgggaacattgtttatgagacgtcgaatgtgtttgaccggatggtggtggtgctaaat
gacattcatattgacatcatggattatatatcccctgcagtgtgcagtgatgctgctttt
agaaccatgtgggcagaatttgagtgggaaaacaaggttgctgtcaacactgtcattcaa
gatgaaaaagaatttcttgaccatataatcaaatcaaccaacatgaagtgccttactgcg
ctgtctgctttggaaggggaatgcgggtttcttgctgctaacttgtatgcaaagagtgtt
tttggcgaggatgctttggtgaatgtaagcattgagaaacaagcagatagtaagctgagc
ggttacattaggataaggagcaaaacccaaggaattgctcttagcttgggagacaagata
acactcaagcagaagggaggcagttga
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